Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09280 |
Symbol | |
ID | 8394819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1069675 |
End bp | 1070871 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644985687 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_003143318 |
Protein GI | 257063646 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGA ACGCGACTAT CACCGACGAG CAGTTTGAGG CTTACCTCAA GCAGATCCGC GAACTGGTGG AAGGTCCTTT TGAGGAGATT CAGAAGGAGG TCGAAGTCAC CAACGTGTTC CCGCAGGAGT TCTATGATCT CGCCATCAAG AACGATCTGT ACCGCTTCTA CCTGCCCGCA GAGTACGGTG GATGGAACCT CAACGAGCTC GAGATCCTGC GCGTCCAGGA AGAGTTCTCC CGTGGCCCTG GCGGAATGCG CATGCATCTC CATCATGCCG CTGACATGAA CTGGCGCATC CTTGACGACT ACGGCAAACC GGAGCTCAAG GCCAAGTACA TGGACAAGTT CCAGGACAAG ACCATCTACT GCAACTTCGC CATCACCGAG CAGACTGGCG GCACCGGTGC TGACCTTCAC ACCACCGCTC TGAAGAACGA GAAGGGCAAC TACGTCCTCA ACGGCGAGAA GTGGCTCATC TCCCACACCG ACTGCTCTGA CTTCACCTAC GTCATCGCTG TGACCGACCC CGAAAGCGAC AAGGATTCCC GCCTGTCCGC ATTCTTCGTT CCCAACGATG CTCCTGGCTT CGAAATCGTC GAAATGCCCC ACATGATGGG CTGCCGCGGC GCCGGCCATG CAGGCCTGAA GTTCAACAAC GTTGAACTCG AGCCCATCTA CCTGCTCGGC GAAGAGGGCC AGGGCATGGA AGTCGCCATC CACTCCCTCT CCGTCTCCCG CGTCCACATC GCCATGTCCA ACCTCGGTAT GGCTCAGCGT ATGCTCGAGA TCACCCTCAA GCGCGCCAAT GACCGCATCA CCTTCGGCAA GCCGATCGCT TCTCGCCAGA TGATCAAAGA GAAGATCGCC CGCATGCAGG CTCACATCCA CACCCTGCGT TGCGCCATCT ACGACTTCGC TCGCGACTAC GACATCGATC CGTACAACGA GTACGTCACC GAGAAGGCCG CCATCTGCAA GCTGGTCTCC ATCGAGACCG TCAAGGAAGT CTCCGACGAG ATGCTGGAGA TCTTCGGTGG CGACGGCTAC TTCGAGGACA GCCCCTACGG CCCGACCGAG CGTCTGTATC GTGACTGCCG CGCCATGTGG CTCGAGGAAG GTGCTCCCAA CGTTCAGAAG ATCACCATCG CTCGCGAGTG CCAGAAGTTC GGCGGCGTCG TCAAGTACAA CTTCTAA
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Protein sequence | MNPNATITDE QFEAYLKQIR ELVEGPFEEI QKEVEVTNVF PQEFYDLAIK NDLYRFYLPA EYGGWNLNEL EILRVQEEFS RGPGGMRMHL HHAADMNWRI LDDYGKPELK AKYMDKFQDK TIYCNFAITE QTGGTGADLH TTALKNEKGN YVLNGEKWLI SHTDCSDFTY VIAVTDPESD KDSRLSAFFV PNDAPGFEIV EMPHMMGCRG AGHAGLKFNN VELEPIYLLG EEGQGMEVAI HSLSVSRVHI AMSNLGMAQR MLEITLKRAN DRITFGKPIA SRQMIKEKIA RMQAHIHTLR CAIYDFARDY DIDPYNEYVT EKAAICKLVS IETVKEVSDE MLEIFGGDGY FEDSPYGPTE RLYRDCRAMW LEEGAPNVQK ITIARECQKF GGVVKYNF
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