| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09190 |
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| Symbol | |
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| ID | 8394810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1060115 |
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| End bp | 1061482 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985678 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_003143309 |
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| Protein GI | 257063637 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.216592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA CCTACATCGA TCAAGCGAAG GCCGCTTACG CCTCCCATGA TTTTGCAGGC
GCCATCGAAG CGTATACGCA ATGCCTGCAG GACGAGGAGG TCGAAAAGGC CCCCGGTGAT
ACCGGGTTCC TGTACCACCA GATTGGCAAC AGCTATTTGC AGATGCGGGA TTTCGAATCC
GCCATCGGCG CGTACAGCCA GGCCGTCGCC GACAGCGCGT ACGACGCCTG CGGCGCGGTC
AACTGCAACA TGGGCAAGGC CTATGCGGCT CTGAAGGATT ATGAGAACGC AGTAGCCTGC
TTCGAAATCG CCACGTCCGA CGCGAAGTAC GCGTCCCGCT ACAAGGCCCA TCTGGGCATG
GGCAATGCTC TGCTGCAGCT GGGGAAGAAC GCCGAAGCCG GCGCCGCTTT CCGCGAGGCC
GCTCTGGACC CTGCCAATCC CGACCCCACG AAGGCCCTGC TCAACCTGGG CGTGTGCTTC
ATGGCTCTCG ACCGTCCCCA GGCGGCCGTC CAGTCCTATG AGAGCGCGCT GCAGTTCGAC
ATGGACCCCG CAATGCGCAA CAAGATGCAA GCCAACCTGG GCCAGGCCTA TGTCGCCTGC
GGCCAGATGC AGAAGGCCAT GAACGCCTTC GAAGCCGCCC TTGCCGACAA GACGTACTTC
CTGACCGGTT CGGCCAGCGT CGACTACAGC AAGGCCGCCA CGGCAGTCGC AACGGGCACC
GCATCCATCG CGCCTGTCGA CGTTCCCCAG TCCGACATAG GGCTGCAGGA TATGACCGGC
CTTGACGTCG CCGCCGATGG CATGCCCATC GACACCGACA TGCAGTATGT GGATGATCCT
ACGCACTATC CGGCAGACCA CTACGGCTAT GAGGTCGACG ACGGCTACGC CTCCGGCGAC
GACCGCTTCT TCAACGCGAC GGACGAGGAG CTTGAAAGCT ACTCCAAGAA TATCGCCCGC
CAGGACCGCA AGCGTCGCAA CGTGGGTTTG AAGATCCTCG TGTTCTTCTT CGTGCTGCTG
CTGGCCGCCG CTGCTGCAGG CGTGTACCTG TACACCCAGG GCTACGGCTA TCCTCAGCAG
CAGGACGTCG TTGCCGACCT GTTCGCCAAC ACCGACAACG CCGCCGAATA CTTCGTCGAC
GGCCTGGCCG ATGCCGATAT CGCCGAAATC ATGAACGAGG TTGTCCAGGA CGACAGCATC
ACCATCGACG GCGTCGACAG GTCCATGTCC ACCTCTACGG TGTATGTGAC TGCAAGCACC
TCCGAGGGCG GGGATGTCAA CTACAAGGTC AGCCTTGCGC GCGACATGAT TGGCTGGAAG
GTTTCTGACG TCGAGCTGTT CTTCCCGTCC GAAGAGCAGT CTGAATAA
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| Protein sequence | MENTYIDQAK AAYASHDFAG AIEAYTQCLQ DEEVEKAPGD TGFLYHQIGN SYLQMRDFES
AIGAYSQAVA DSAYDACGAV NCNMGKAYAA LKDYENAVAC FEIATSDAKY ASRYKAHLGM
GNALLQLGKN AEAGAAFREA ALDPANPDPT KALLNLGVCF MALDRPQAAV QSYESALQFD
MDPAMRNKMQ ANLGQAYVAC GQMQKAMNAF EAALADKTYF LTGSASVDYS KAATAVATGT
ASIAPVDVPQ SDIGLQDMTG LDVAADGMPI DTDMQYVDDP THYPADHYGY EVDDGYASGD
DRFFNATDEE LESYSKNIAR QDRKRRNVGL KILVFFFVLL LAAAAAGVYL YTQGYGYPQQ
QDVVADLFAN TDNAAEYFVD GLADADIAEI MNEVVQDDSI TIDGVDRSMS TSTVYVTAST
SEGGDVNYKV SLARDMIGWK VSDVELFFPS EEQSE
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