Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_08700 |
Symbol | |
ID | 8394761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1009495 |
End bp | 1009983 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644985630 |
Product | LSU ribosomal protein L11P |
Protein accession | YP_003143266 |
Protein GI | 257063594 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0080] Ribosomal protein L11 |
TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0198308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000021546 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTGAGA AGAAAGTAAC TGGCTTCATT AAGTTGCAGA TTCCTGGCGG CAACGCAACC CCGGCTCCTC CGGTTGGTCC CGCGTTGGGC GCTCAGGGCG TCAACATCAT GCAGTTCGTT CAGGCTTTCA ATGCCGAGAC TGCAGACAAG AAGGGCACCA TCATCCCCGT CGAGATTACC GTCTACGAGG ACAAGTCCTT CACCTTCATT TGCAAGACCC CTCCTGCAGC TGTGCTGATC AAGCAGGCTC TGGGTATCGA GCATGCCAGC GGCATCCCGC AGCTCAAGTT CGTCGGCACC CTGTCCGAGG ATCAGCTGCG TCAGATCGCC GAGACCAAGA TGCCCGACCT GAACGCGAAC GACATCGATG CCGCCATGAA CATCATCGCT GGCACCGCTC GTTCCATGGG CGTCCGTGTT GAAGGCCGCG AGATGAAGAA GACCTACGTC CCGTCTCGTA AGGTCGCCGA AATGCTGAAG AACTCGTAA
|
Protein sequence | MAEKKVTGFI KLQIPGGNAT PAPPVGPALG AQGVNIMQFV QAFNAETADK KGTIIPVEIT VYEDKSFTFI CKTPPAAVLI KQALGIEHAS GIPQLKFVGT LSEDQLRQIA ETKMPDLNAN DIDAAMNIIA GTARSMGVRV EGREMKKTYV PSRKVAEMLK NS
|
| |