Gene Shel_08700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08700 
Symbol 
ID8394761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1009495 
End bp1009983 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content57% 
IMG OID644985630 
ProductLSU ribosomal protein L11P 
Protein accessionYP_003143266 
Protein GI257063594 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0198308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000021546 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGAGA AGAAAGTAAC TGGCTTCATT AAGTTGCAGA TTCCTGGCGG CAACGCAACC 
CCGGCTCCTC CGGTTGGTCC CGCGTTGGGC GCTCAGGGCG TCAACATCAT GCAGTTCGTT
CAGGCTTTCA ATGCCGAGAC TGCAGACAAG AAGGGCACCA TCATCCCCGT CGAGATTACC
GTCTACGAGG ACAAGTCCTT CACCTTCATT TGCAAGACCC CTCCTGCAGC TGTGCTGATC
AAGCAGGCTC TGGGTATCGA GCATGCCAGC GGCATCCCGC AGCTCAAGTT CGTCGGCACC
CTGTCCGAGG ATCAGCTGCG TCAGATCGCC GAGACCAAGA TGCCCGACCT GAACGCGAAC
GACATCGATG CCGCCATGAA CATCATCGCT GGCACCGCTC GTTCCATGGG CGTCCGTGTT
GAAGGCCGCG AGATGAAGAA GACCTACGTC CCGTCTCGTA AGGTCGCCGA AATGCTGAAG
AACTCGTAA
 
Protein sequence
MAEKKVTGFI KLQIPGGNAT PAPPVGPALG AQGVNIMQFV QAFNAETADK KGTIIPVEIT 
VYEDKSFTFI CKTPPAAVLI KQALGIEHAS GIPQLKFVGT LSEDQLRQIA ETKMPDLNAN
DIDAAMNIIA GTARSMGVRV EGREMKKTYV PSRKVAEMLK NS