Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_08500 |
Symbol | |
ID | 8394741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 990481 |
End bp | 990921 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644985610 |
Product | T/G mismatch-specific endonuclease |
Protein accession | YP_003143250 |
Protein GI | 257063578 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.119138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCA AGGCTCCCCA TTTCGAGAAC GTGTCTCCGG CCGTACACAA GAGCATGACG TCGAACAAGG GCAAGAACAC CAAGCCTGAA CTGCTGGTGC GCAAACGACT TCGCGAAGAC GGGCTTCTGG GGTACCGCGT GCACTGGAAG GTGCCGGGGC ACCCCGATGT GGCATGGCCT GGCAAGAAGG TCGCGATCTT CGTCCACGGC TGCTTCTGGC ACCGTTGCCC GCACTGCCAG CTTCCCGTGC CGAAGACGAA TCAGGAATAC TGGATCCCTA AGTTCGAGCG CAATGTCGAG CGGGACCGAG AGAACATTGC CAAGCTGGAA TCCGACGGTT GGCGCGTGCA TGTCATTTGG GAATGCGAGT TGAAAAAGAA GAACGTCGAG GCCACGTTCG ACACGCTTCT GCCCGAACTC CATAAGGAAT TGGGCAAGTA G
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Protein sequence | MTSKAPHFEN VSPAVHKSMT SNKGKNTKPE LLVRKRLRED GLLGYRVHWK VPGHPDVAWP GKKVAIFVHG CFWHRCPHCQ LPVPKTNQEY WIPKFERNVE RDRENIAKLE SDGWRVHVIW ECELKKKNVE ATFDTLLPEL HKELGK
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