Gene Shel_07990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07990 
Symbol 
ID8394690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp926880 
End bp927227 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content60% 
IMG OID644985559 
Producthypothetical protein 
Protein accessionYP_003143204 
Protein GI257063532 
COG category[S] Function unknown 
COG ID[COG1302] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000327708 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAG AACTGTATGC AGACGGCTTG GGCATCGCCC CCGGTGTTAT GGAGACCATT 
GTCGCCCTCG CCGCAAAAGA AGTTGATGGC GTAGCCTCCG TCGGCTCCTC CACGCTGTCC
GGATTCCGCT CCCGTTTGTC TGCCAAGCCC GCCAACCAGG GCATCGACGT GACCATGGAC
GAAGATCAGC AGATCAACGT GGCCATTCAC ATCGACGTTC TGTACGGCAA GGTCATCCCT
GTCGTCGCCG AGGCCGTCCG TGCCGCTGTC GCCGACGCCG TCGCCACCCA GGTCGGCTTC
GACCTGGCTG CAGTCGATGT GTTCGTCGAT GGTCTTGTGT TCGAATAA
 
Protein sequence
MSEELYADGL GIAPGVMETI VALAAKEVDG VASVGSSTLS GFRSRLSAKP ANQGIDVTMD 
EDQQINVAIH IDVLYGKVIP VVAEAVRAAV ADAVATQVGF DLAAVDVFVD GLVFE