Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_07790 |
Symbol | |
ID | 8394670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 901776 |
End bp | 903254 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985539 |
Product | predicted permease |
Protein accession | YP_003143184 |
Protein GI | 257063512 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.132097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAGC TTCAAAGGGA AGAAGAACTC AAAAAAACCG AGAAGGCGAA ACGCACGTTC TACCGTGCCT GGGGCATCAT CGGCATCGTC GTTATCGTCG CGGGCATAGG CTATGTGCTT CGTATCCTCT CCACGCCGCT TTCCATCGTG ATGTGGGCCA CGCTGTTCGT GTTCATCCTG CGTTCACCGG TGGCCTTCTT CGAGAGCAAG GGTATCCCGC GCGTCTGGGG CACGGCCATA TCCTACGTCG TCATGTTCGC GGTCCTGTCG GTGCTGGTCG CCATTATGTT CTCGCCTACC GACGGCATCG GTGAGCAGGC CGAGAACTTC ATCGCGTCCA TCCCCGGGTG GGCCACCAAC GTGGCGGACT GGATCAACGC CAACTACGAC CAGTATGCGC ACATGTTCGA CGAAACCACC GTGCGCGAAT GGCTCGACAG CTTCCTGTCG TCCATGTCCG CCTGGGCAAA CGAGCTGGCC AGCGCATCCG CTACTTCCAT CCTCGATTTC ACGAGCGGCC TGGCAAACTC GCTCATGATC ATCATCTTCG GCCTCATCGT CGCATTCTGG ATTCTCATGG AGCTGCCTGC GATGGGTCGC GAGTTCCGCC GCATGGTCCC CGACCGCTTC TCCGACGACG TGGAAATGCT GTACCTCACG GTCACGCAGG CGATGGGCGG CTATGTGCGC GCCACGCTGG TGGTGTGCCT GTCCATCGGC GTCGCGTGCG GCTTGGTGTT CGGCATCGCG AGCGTTCCCA ATGCCGCCGT GCTTGCCCTG ATCGCCGCCG TGCTCAACGT CATTCCCGTG GTCGGCCACT GGATCGGCCT GTTCTTGGTC ACGGGCATCG CCCTGTTCTC CGGGCCGATC ACCGCCGTCA TCGTGTTCGT CAGCACGCTG ATCATCCAGG AAATCGTCTA CATGCTCATC CAGCCGAAGC TCATGTCCAA TTCTGTGGAC GTACATCCGG CGCTGGTCAT CGTGGCCATG TTCATCGGCA GCTCCGCTGG CACCGCTTTG GCGGGCATCG TCGGATCCAT CGTGGGCATG CTCATCTCCA TTCCCGTCGC GGCCATTCTC AAGTCGCTGT TCGTGTACTA CTACGAGAGG GGAACGGACC GCCAGCTGGT GTCCGAAGAC GGCGTTTTCT TCAAGGCCAC GCCGCAGCAC GACCAGACGG ACGACACCAA GCCAGATGCC ATGGCCGACG CCGTGGCTCC CGTTCATCGC GCCGAGGCAG GTGTGACCAG CAGCTTCGTG CCGTGGTTCA CCGGCCGCAT GCCCGTCGAC CTCTCTTATG ACGGTGAAGA ATCCGAAGAA CCCCACGCCT CTGCCGGCCT TACCGGCAAA CTCACCGAAC GCATCAGGGG GCGCCATGCC GCCGACACTC AGGATGCCGA CGATTCCGGG CTGGACATCC ATGTGACCGA CGCGCAGATC GTCGACGAGG AGCGTCGCAA CCGCCACACG GGCCGATAA
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Protein sequence | MEELQREEEL KKTEKAKRTF YRAWGIIGIV VIVAGIGYVL RILSTPLSIV MWATLFVFIL RSPVAFFESK GIPRVWGTAI SYVVMFAVLS VLVAIMFSPT DGIGEQAENF IASIPGWATN VADWINANYD QYAHMFDETT VREWLDSFLS SMSAWANELA SASATSILDF TSGLANSLMI IIFGLIVAFW ILMELPAMGR EFRRMVPDRF SDDVEMLYLT VTQAMGGYVR ATLVVCLSIG VACGLVFGIA SVPNAAVLAL IAAVLNVIPV VGHWIGLFLV TGIALFSGPI TAVIVFVSTL IIQEIVYMLI QPKLMSNSVD VHPALVIVAM FIGSSAGTAL AGIVGSIVGM LISIPVAAIL KSLFVYYYER GTDRQLVSED GVFFKATPQH DQTDDTKPDA MADAVAPVHR AEAGVTSSFV PWFTGRMPVD LSYDGEESEE PHASAGLTGK LTERIRGRHA ADTQDADDSG LDIHVTDAQI VDEERRNRHT GR
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