Gene Shel_07780 details

Gene Information

• Locus tag: Shel_07780
• ID: 8394669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Slackia heliotrinireducens DSM 20476
• Kingdom: Bacteria
• Replicon accession: NC_013165
• Strand: +
• Start bp: 901140
• End bp: 901754
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644985538
• Product: uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain
• Protein accession: YP_003143183
• Protein GI: 257063511
• COG category: [R] General function prediction only
• COG ID: [COG4768] Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.117632
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCTGTGA TTTCTGAGAT CATCATTCCC ATCGTTTATG TTGTCGTCGG AATCGCCCTG 
ATTGCAGCGC TTGTCGAGCT GTTCTTGGTG CTGCGCACGA CGCGCAAGAC AGTAGACGAT 
CTGAACGCGC AGGTTCAGCC TGTGCTTGCG GACGTCAAGA CCATCACCGA AAGCGCCAAG 
CCCGCAGTGG ACCGGGTGGA TCCGCTGGTG GAGCGCGTCG CTCTGACGGT CGATGCGGCC 
AACCTTGAAA TCATGCGCCT GGACGGCATC CTCGAGAACG TGGGCACCAT CACCGAAACC 
GCATCCAACG CCACGCAGGC TGTGGACGCC ATCACGTCCA CGCCGCTGCG CGCCGTTTCC 
GACGCCACGG CCCGCGTCCG CGACATCTTG GGCTCCAAGA AGGCTTCCGA CGAATCCAAG 
CAACTTGCCG AAAATGCCGA AAGCTTCGCC GAGCTTGAAG ACGGCGAAAT CGTTTCCCTC 
GAATCCTTGG CCGTCACCGG TTCGGAGAAT CAGGCTCCTT CCGGCGAACC CGAGCAGGCC 
GCAGCACCTG CCGACAAGCC CGACCCGATC GCCGAGAAGT ACTTCACCTA CGGCAAGCCT 
GCCGCTGAGG AATAG 

 

Protein sequence

MPVISEIIIP IVYVVVGIAL IAALVELFLV LRTTRKTVDD LNAQVQPVLA DVKTITESAK 
PAVDRVDPLV ERVALTVDAA NLEIMRLDGI LENVGTITET ASNATQAVDA ITSTPLRAVS 
DATARVRDIL GSKKASDESK QLAENAESFA ELEDGEIVSL ESLAVTGSEN QAPSGEPEQA 
AAPADKPDPI AEKYFTYGKP AAEE