Gene Shel_07680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07680 
Symbol 
ID8394659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp890758 
End bp891522 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content59% 
IMG OID644985528 
ProductABC-type transport system involved in cytochrome c biogenesis, permease component 
Protein accessionYP_003143173 
Protein GI257063501 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.679091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.236691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACAAA CAACCAAAGA TAAGTTCGCC GTCGGCGGAA TCCTGGACAC CATCGCCCCA 
TGGGTGATGC TGCTGGGCGG CCTGCTGATT ACCGTGGGCT TCGTCCTGTC GTTCACCACG
GCACCGCTCG TCAACGGTGC GGGTGTGAAC GAACCCGCAG TCATCGGCGG TGTCGTTATC
GCGAACAAAC TGCTGCTGTC TCAAAAGATC TTCTATTGGC ACGTGCCTGT AGCCGTGGCC
AGCGCCATCG CCCTTTTGCT GATGGCGTAC TTCAGCGTTC GGTTCCTCAT GACGCGCAAG
CACGAATACG ACATGCGCGC CAACATCGCC ATGGAGCTCA GCCTGGTCTT CGTGCTGTGT
ACGATGGTCT CCGGCACGTT CTGGGAGCGT TTCGAGTGGG GCGTGTGGTG GACGTGGGAG
CCGCGACTGA CCACCTACTT CATTCTGATG ATGCTGGTGT TCGGTTACTT CATCCTACGC
AATGCCATCG ACGACCCCGA GCGTCGCGGC GTGTATTGCG CCGTGTTCGG CATCCTGTCC
TTCGTGGACA TGCCGATTAG CTTCGTCGTC ACGCGTCTGG TTCCTTCCAG CCTGCACCCG
GTGGTGTTCC GCACCGATTC GGGCCTGTCG CCCGACATGT TGCTGCCGTT CCTGCTGAGC
ATGTTCGGCA TGTGCATGGT TCTGTACGGC CTGTATCGTC TGCGTCTGCG CACCCAGCTC
ATCCAGGAGC GCGTCGACGC CATTCAAGAG ACTTTGGAGG ATTAA
 
Protein sequence
MAQTTKDKFA VGGILDTIAP WVMLLGGLLI TVGFVLSFTT APLVNGAGVN EPAVIGGVVI 
ANKLLLSQKI FYWHVPVAVA SAIALLLMAY FSVRFLMTRK HEYDMRANIA MELSLVFVLC
TMVSGTFWER FEWGVWWTWE PRLTTYFILM MLVFGYFILR NAIDDPERRG VYCAVFGILS
FVDMPISFVV TRLVPSSLHP VVFRTDSGLS PDMLLPFLLS MFGMCMVLYG LYRLRLRTQL
IQERVDAIQE TLED