Gene Shel_07300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07300 
Symbol 
ID8394621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp852165 
End bp853067 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID644985491 
Producttranscriptional regulator 
Protein accessionYP_003143137 
Protein GI257063465 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACCG ACGTGTTGCG CAACTTCGTT GCCTTGTCTG ACGAGAAGAG CATGACGAGG 
GCCGCCAAGC GGCTGCACAT ATCACAGCCC ACGCTGTCGC GCCAAATGTC CGCGCTCGAA
GACGATTTGG GGAAACAGCT GTACATACGC GAGGAGGGCA TCATCAAGCT CACGGTGGAT
GGCCAAATCC TGTACGACTA CGCAACCTCC ATCGTAGAAC TCGAAGACCG CGCACGCACC
GCCATCGCTC ACTCAGACGA GCACGTTACC GGCACGGTAT ATATCGGGCA CGGCGACTCG
AATTCCATGC AGTATCTGTT CCAGGCCATG AGCAATGTGC GAGAACGGCA TCGCGGCGTC
ACATTCAATC TGGTGTCGGG CGACACCCAT TCCTTGGTGG AAAAGCTCAA CCAGGGATCC
ATCGACTTCA TGCAGGAGTG CGGCGCACGT CAACGCGGAC GCTATCTTGC ACTGCCCTTG
CCTGGCCAAG ACACAATCGC CGCGCTCGTG GGGCCGCAAA GCCGCCTGTT CGGGCTCGAG
AAAGTAACGC CGAGCGACCT GGCAGGCGAA GACCTTGTGG TGTCGAAACA GCTGCTCGAA
AGCGACGTTA TGAGAAACTG GGCCGGCGAC CAGTATCCCC AGCTGCACTC CATTGTGAAC
TTCAACCTGG GCATGACGGT CGTTGACCTG GCCGAATACG GCTCAACCTG CGTTATCGGC
TACCAAGAGC TGGCAGAGCG CTATTACGGC CAGGCCATCG ACTGCATCCC GCTGGACCCG
CCGATCGTCG ACGAAAGCGC CATCGTGTGG CGCAAGAACC GGCCGCTGTC CCCTGCCGCC
CAGGCGTTTT TGGATGCGCT GCAAGCTATA TGCGAGAAGG CGGCACCGTC TGTTGGGCGC
TAA
 
Protein sequence
MRTDVLRNFV ALSDEKSMTR AAKRLHISQP TLSRQMSALE DDLGKQLYIR EEGIIKLTVD 
GQILYDYATS IVELEDRART AIAHSDEHVT GTVYIGHGDS NSMQYLFQAM SNVRERHRGV
TFNLVSGDTH SLVEKLNQGS IDFMQECGAR QRGRYLALPL PGQDTIAALV GPQSRLFGLE
KVTPSDLAGE DLVVSKQLLE SDVMRNWAGD QYPQLHSIVN FNLGMTVVDL AEYGSTCVIG
YQELAERYYG QAIDCIPLDP PIVDESAIVW RKNRPLSPAA QAFLDALQAI CEKAAPSVGR