Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_07300 |
Symbol | |
ID | 8394621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 852165 |
End bp | 853067 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985491 |
Product | transcriptional regulator |
Protein accession | YP_003143137 |
Protein GI | 257063465 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACCG ACGTGTTGCG CAACTTCGTT GCCTTGTCTG ACGAGAAGAG CATGACGAGG GCCGCCAAGC GGCTGCACAT ATCACAGCCC ACGCTGTCGC GCCAAATGTC CGCGCTCGAA GACGATTTGG GGAAACAGCT GTACATACGC GAGGAGGGCA TCATCAAGCT CACGGTGGAT GGCCAAATCC TGTACGACTA CGCAACCTCC ATCGTAGAAC TCGAAGACCG CGCACGCACC GCCATCGCTC ACTCAGACGA GCACGTTACC GGCACGGTAT ATATCGGGCA CGGCGACTCG AATTCCATGC AGTATCTGTT CCAGGCCATG AGCAATGTGC GAGAACGGCA TCGCGGCGTC ACATTCAATC TGGTGTCGGG CGACACCCAT TCCTTGGTGG AAAAGCTCAA CCAGGGATCC ATCGACTTCA TGCAGGAGTG CGGCGCACGT CAACGCGGAC GCTATCTTGC ACTGCCCTTG CCTGGCCAAG ACACAATCGC CGCGCTCGTG GGGCCGCAAA GCCGCCTGTT CGGGCTCGAG AAAGTAACGC CGAGCGACCT GGCAGGCGAA GACCTTGTGG TGTCGAAACA GCTGCTCGAA AGCGACGTTA TGAGAAACTG GGCCGGCGAC CAGTATCCCC AGCTGCACTC CATTGTGAAC TTCAACCTGG GCATGACGGT CGTTGACCTG GCCGAATACG GCTCAACCTG CGTTATCGGC TACCAAGAGC TGGCAGAGCG CTATTACGGC CAGGCCATCG ACTGCATCCC GCTGGACCCG CCGATCGTCG ACGAAAGCGC CATCGTGTGG CGCAAGAACC GGCCGCTGTC CCCTGCCGCC CAGGCGTTTT TGGATGCGCT GCAAGCTATA TGCGAGAAGG CGGCACCGTC TGTTGGGCGC TAA
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Protein sequence | MRTDVLRNFV ALSDEKSMTR AAKRLHISQP TLSRQMSALE DDLGKQLYIR EEGIIKLTVD GQILYDYATS IVELEDRART AIAHSDEHVT GTVYIGHGDS NSMQYLFQAM SNVRERHRGV TFNLVSGDTH SLVEKLNQGS IDFMQECGAR QRGRYLALPL PGQDTIAALV GPQSRLFGLE KVTPSDLAGE DLVVSKQLLE SDVMRNWAGD QYPQLHSIVN FNLGMTVVDL AEYGSTCVIG YQELAERYYG QAIDCIPLDP PIVDESAIVW RKNRPLSPAA QAFLDALQAI CEKAAPSVGR
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