Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_06980 |
Symbol | |
ID | 8394590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 813523 |
End bp | 814587 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644985460 |
Product | hypothetical protein |
Protein accession | YP_003143106 |
Protein GI | 257063434 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.316809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0886062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGACT ACGACGTGAC CATCGACGGG TACCGATACA CCCGTCTGCA GGAGGCCGGC TTCATTCTGC TTGGCTTCTG TCTGGGGATT CCTGGCATCC TGATCGACTG GGCCATTGCC CGCAAGCAGA AGATGATGGA ATGCTCGGCC GAGGGTATCT GGCTCGGTAT CATCGGATGG GCATTCGGCT ACTTCTGCTG GTACATCCTT ACCGTCACGG GCGTGTGGGC ACCGGCCGCC AGCGTCTGGT GCATCCTCAC GCTGTCGTTC GGCGGCGCGC TGGCGGGTCT AGCGGGCATC ACGGTTGGTG CGGCGTACGT GGCCCCGGGC AACCTGAGCA CGCTGTGGTT CGTGGGCTCC ATCCTGTTCA TCATTCTTGC CGACATGTGG GTCTACGGCA TGAAGTACAA GATGACCCCT GCTGAGAAGG CCACGCCCAT CATCGGCGAC GACTGGATCA AGCCCGGTGA GAAGCATCTG CGTTACGATT CCGGCGTTAC CATCAACGCG CCGGCCAAAA AGGTTTGGGC CTACGTGCAG CAGTCCGGTC AGACCAAGGC TGGCTGGTAC AGCTTCGATT GGCTTGAGCG TCTGTTTACC TTCGATATCC ACAACCACTA CGACATCCAT CCCGAGTGGC AGAACCTGCA GCCGGGCGAG TACCAGTGGT TCCATCAGGC GCCGCTTTCC ATCGGCGAGT GGGTGACCGA GGTCTCGCAC GAAGACCCCT ACGGCTGGGC CGCGCACTCC GACACCGCCA CCGACCCCAG CTACAAGAAC CGCGGTCCTA ACGGCGAAGC CGCCCTCAAG CTCTGGTTCC GCCGCTTCTG CTGGACCTGG AATTGGGAGG TCCGCTCCAT CGAAGGCACT GCTGATAACC CTGAGCGTTG CCGTCTGCGC TGGCGCTGCG ACTGCGTGTC CGACCCCGAC TCCCGCACGC CTTGGGCGAA GTATTTCAAC GTGTTCATCC TGGGCACCGC AAGCATCGTC ATGGGCCGCC GCTACATGGA TGTGATGAAG AAGCTGGCCG AAGGCCGCAT GACCTACCCC GAAAGCAAGC GCTAA
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Protein sequence | MKDYDVTIDG YRYTRLQEAG FILLGFCLGI PGILIDWAIA RKQKMMECSA EGIWLGIIGW AFGYFCWYIL TVTGVWAPAA SVWCILTLSF GGALAGLAGI TVGAAYVAPG NLSTLWFVGS ILFIILADMW VYGMKYKMTP AEKATPIIGD DWIKPGEKHL RYDSGVTINA PAKKVWAYVQ QSGQTKAGWY SFDWLERLFT FDIHNHYDIH PEWQNLQPGE YQWFHQAPLS IGEWVTEVSH EDPYGWAAHS DTATDPSYKN RGPNGEAALK LWFRRFCWTW NWEVRSIEGT ADNPERCRLR WRCDCVSDPD SRTPWAKYFN VFILGTASIV MGRRYMDVMK KLAEGRMTYP ESKR
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