Gene Shel_06980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06980 
Symbol 
ID8394590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp813523 
End bp814587 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content61% 
IMG OID644985460 
Producthypothetical protein 
Protein accessionYP_003143106 
Protein GI257063434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.316809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0886062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGACT ACGACGTGAC CATCGACGGG TACCGATACA CCCGTCTGCA GGAGGCCGGC 
TTCATTCTGC TTGGCTTCTG TCTGGGGATT CCTGGCATCC TGATCGACTG GGCCATTGCC
CGCAAGCAGA AGATGATGGA ATGCTCGGCC GAGGGTATCT GGCTCGGTAT CATCGGATGG
GCATTCGGCT ACTTCTGCTG GTACATCCTT ACCGTCACGG GCGTGTGGGC ACCGGCCGCC
AGCGTCTGGT GCATCCTCAC GCTGTCGTTC GGCGGCGCGC TGGCGGGTCT AGCGGGCATC
ACGGTTGGTG CGGCGTACGT GGCCCCGGGC AACCTGAGCA CGCTGTGGTT CGTGGGCTCC
ATCCTGTTCA TCATTCTTGC CGACATGTGG GTCTACGGCA TGAAGTACAA GATGACCCCT
GCTGAGAAGG CCACGCCCAT CATCGGCGAC GACTGGATCA AGCCCGGTGA GAAGCATCTG
CGTTACGATT CCGGCGTTAC CATCAACGCG CCGGCCAAAA AGGTTTGGGC CTACGTGCAG
CAGTCCGGTC AGACCAAGGC TGGCTGGTAC AGCTTCGATT GGCTTGAGCG TCTGTTTACC
TTCGATATCC ACAACCACTA CGACATCCAT CCCGAGTGGC AGAACCTGCA GCCGGGCGAG
TACCAGTGGT TCCATCAGGC GCCGCTTTCC ATCGGCGAGT GGGTGACCGA GGTCTCGCAC
GAAGACCCCT ACGGCTGGGC CGCGCACTCC GACACCGCCA CCGACCCCAG CTACAAGAAC
CGCGGTCCTA ACGGCGAAGC CGCCCTCAAG CTCTGGTTCC GCCGCTTCTG CTGGACCTGG
AATTGGGAGG TCCGCTCCAT CGAAGGCACT GCTGATAACC CTGAGCGTTG CCGTCTGCGC
TGGCGCTGCG ACTGCGTGTC CGACCCCGAC TCCCGCACGC CTTGGGCGAA GTATTTCAAC
GTGTTCATCC TGGGCACCGC AAGCATCGTC ATGGGCCGCC GCTACATGGA TGTGATGAAG
AAGCTGGCCG AAGGCCGCAT GACCTACCCC GAAAGCAAGC GCTAA
 
Protein sequence
MKDYDVTIDG YRYTRLQEAG FILLGFCLGI PGILIDWAIA RKQKMMECSA EGIWLGIIGW 
AFGYFCWYIL TVTGVWAPAA SVWCILTLSF GGALAGLAGI TVGAAYVAPG NLSTLWFVGS
ILFIILADMW VYGMKYKMTP AEKATPIIGD DWIKPGEKHL RYDSGVTINA PAKKVWAYVQ
QSGQTKAGWY SFDWLERLFT FDIHNHYDIH PEWQNLQPGE YQWFHQAPLS IGEWVTEVSH
EDPYGWAAHS DTATDPSYKN RGPNGEAALK LWFRRFCWTW NWEVRSIEGT ADNPERCRLR
WRCDCVSDPD SRTPWAKYFN VFILGTASIV MGRRYMDVMK KLAEGRMTYP ESKR