| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06920 |
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| Symbol | |
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| ID | 8394584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 808370 |
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| End bp | 809998 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985454 |
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| Product | predicted TIM-barrel fold metal-dependent hydrolase |
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| Protein accession | YP_003143100 |
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| Protein GI | 257063428 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.256585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCG CTTCAACCAT CATTACAAGC AACCACGTAT TCACGGGCCT CGACGACGCC
GCCCGGCCTT TGGCCGTCTG CATCCAGGAC GGGATCATCG TCGATATTGT ATCCCGCGAA
AGCATCGATC TGCCCGCGGA CAACGTCACC GATTACGAAG ACGCGTTCAT CTGCGCAGGT
TTCCACGACG GACATCTGCA CGCCTTCCAT TCGGCGCTGT ACTCAAGCCC TCTTGCCACC
GACTATCTAG GCGCATCTGA AGCGGATTGC GTTCGCCACA TGCAAGAGTT CGCAAAAACC
CGACCGACCG GCTGGCTTCT CAGCCAGGGA TGGCGCGAAT ACCGGTGGAA CCCTTCGGGC
ATGCCGTCGA AGGCGTCGCT GGACGCGGCG TTTCCCGACC GCCCCGTGGC CATGTACTCC
GGCGACGCCC ACACCCTGTG GGTGAACACC TGCGCCCTGC GTGAACTGGG CATTACCGCC
GACAGCGTGC CGCCGGCGGG CGGCAACTAC GCCAAGGACA AAAACGGCGA GCTGACCGGC
ATCATCCAGG AGGCTGCGGC CATGGAGCTC ATGCCCCGCA TCGTCGGCGG GTTCTCAAAC
GACGAGATAG ACGACGCCTA CCGCTCCTTC ACGCAGCGTC TGGCGGCCCA GGGCATCACA
AGCATCTGCG ACATGAGCCT CATGGCATTG CCCGGACTGG ATTTCATCCG CGAGGACGTG
TATTCGCGGC TGGACGAAGC GGGCGAACTG CCCGTACGCG TAACCATGTT CCCCACCCTG
CTGGACGATA CGTCGCGGTT CGATGCGCTG CACGAACGGT TCCGCGGACC CAAGCTGACG
GCCCCTGGCT ACAAGCAGTT CTTCGACGGC GTGTCCAGCA TGCATACGGC GTACGTGCTT
GAGCCTTACA TCAATCCGTA TTTCGAAGGC GACCGCGGAC GCACCACCAT CGCTTATGAG
GACATGCGCG ACCTGGTGCT GCGGGCGAAC GCCGCCGGAC ATCCCGTGCG CATCCATACC
ATCGGCGACC AAGCGATTCA CCTGGCCCTT GACATCTTCG AGGAATCCCT GGCGGCAAAC
GGCCCGCTGC CAGACGGTCT GCGCAACACT TTGGAGCATC TGGAGAACTT CCAGCCCGAC
GACATGGCTC GGTTAGCAAA GCTCGACGTC ATCGCGTCGG TGCAGCCGCC CCACATCACG
CTGGATCCAC TGGGCCCCGA ACGCGACCTG GGCGAGGACC GCTGCCGTTA CATGTGGCCT
TTCAAAACGT TTTTGGACGA CGGCACCGTC ATGGCCTTCG GCACCGACTC CCCTGTTGTT
GCGCCGCGTT CCATGGACGT GCTCTTCTGC GCCGTGACGC GCCAGGATCC CAAGAGCCTC
TGGCCCGAAG GCGGATGGCA GCCCCAAGAG CGAATCGGCA TGGCGGACGC CCTTCGCGCC
TACACGGCGG GATCGGCTGC CGCGGCGGAG CGCAGCGACA TAGGGTTCCT GAAAACGGGA
CTCCGCGCTG ACCTGGCAAT CCTTGATACC GACCTGTTGT CTCCCCAGGT CAAAGCCGAG
CCGACGCGCA TTCTGCAGAC CAAGGTGCTG GCAACGTACC TTGACGGGAA AACAACCTTT
ATCAGATAA
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| Protein sequence | MRPASTIITS NHVFTGLDDA ARPLAVCIQD GIIVDIVSRE SIDLPADNVT DYEDAFICAG
FHDGHLHAFH SALYSSPLAT DYLGASEADC VRHMQEFAKT RPTGWLLSQG WREYRWNPSG
MPSKASLDAA FPDRPVAMYS GDAHTLWVNT CALRELGITA DSVPPAGGNY AKDKNGELTG
IIQEAAAMEL MPRIVGGFSN DEIDDAYRSF TQRLAAQGIT SICDMSLMAL PGLDFIREDV
YSRLDEAGEL PVRVTMFPTL LDDTSRFDAL HERFRGPKLT APGYKQFFDG VSSMHTAYVL
EPYINPYFEG DRGRTTIAYE DMRDLVLRAN AAGHPVRIHT IGDQAIHLAL DIFEESLAAN
GPLPDGLRNT LEHLENFQPD DMARLAKLDV IASVQPPHIT LDPLGPERDL GEDRCRYMWP
FKTFLDDGTV MAFGTDSPVV APRSMDVLFC AVTRQDPKSL WPEGGWQPQE RIGMADALRA
YTAGSAAAAE RSDIGFLKTG LRADLAILDT DLLSPQVKAE PTRILQTKVL ATYLDGKTTF
IR
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