Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_06660 |
Symbol | |
ID | 8394558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 778155 |
End bp | 779315 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985428 |
Product | hypothetical protein |
Protein accession | YP_003143074 |
Protein GI | 257063402 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.100773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGCC CTAACTGCGG TGCCGAGCTC AAGGAAGGCG CGGCGTTTTG CATCCAATGC GGAACGCCTG TGAGCAGCGC GGCCCCCACC CAGCCTACTC AACCCGCTCA GCCCACCATG CCGGTCCAGC AACCGACCGT TCCGGTTTCT GCACCCGCGA CTCCCGCTGC GGCTCCCACG CAGCCGGTCC AGCCTGCATA TCAGCCGACG GCGCAGCAGC CCTTCGTGCC TCAGCAGGAT CCCTATGCGC AGCAGACCCA GGCGTATGCT CCTGCCCAGG ATCCCAATGT CCAGCAACAG CCCTTTGCGC CTCAACAGGC GCCTTATCAG AATCAGGCGC CGTACCAAAA CCAGAAATCC GGTGGAAAGC GCACCGGTCT GATCATCGGC GGCATCGCCG CTGTGCTTCT GCTCATCCTG GGTGGCGTGG GCATCGCCGG CGTGTTGTCT GGCGGCGATG ACAAAGTCGC AGATGAAAAG CCCGCCGCCA CGACTGAGAA AGCAACGGAA ACGGAAGAGG AGGCCGGTGC TGCGACAGAG ACTGAAGCCC CCGCGCAGGA AGAGGCCACT ACCGAAGAGG CTACGGAGGA CCCCGCAGAA CCTGCAGCAA CAGGGGCCGA CTACTCTGCC GTGCTTGATT CCCATGGCGG CCTGACCGTC GATGCCGTTA CCACGTTGAG CGGGTCGGAC CTGTATGACC TGCTTATGTC GAAGGGATTC GAATACGACG CGTCGTACGG CGAGTATGTG TGCTATTACG AACCGTTCCA GGCTTTTGCA GTCAGCGTTG ATGGTTCGAC TGTTCTGGAC GAAAGCGGTA TGAGGTCGTT GTCCATCGGT GGTGCGGGCG ACCCTGTCGT GTACGTCATT GCTGCGTATG ACTACGGAGA CGACCTGAAC GGTGCTTACG ATGCAATCGT CGGCGACAGC GCCAGCGATA AGCTGGTTCT CGACGAAGAA ACGATTGTTG CAAAGGTCGA GAACGAAGGC GGCAAATACT TCGTGATGGC CATGAACTCC GAAGGCGACC TTGGTCCGAC TTTCGCCGTT GTGAGCGAGG AGGCCATCTC TTCCGGTGTG TTCTACACCT GGACCGGCCT CGATACCAGC TTCGGTTCGA CGGTTGACGA GCTTTACGGC AGCTTCACGA GCCAGGCATA A
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Protein sequence | MNCPNCGAEL KEGAAFCIQC GTPVSSAAPT QPTQPAQPTM PVQQPTVPVS APATPAAAPT QPVQPAYQPT AQQPFVPQQD PYAQQTQAYA PAQDPNVQQQ PFAPQQAPYQ NQAPYQNQKS GGKRTGLIIG GIAAVLLLIL GGVGIAGVLS GGDDKVADEK PAATTEKATE TEEEAGAATE TEAPAQEEAT TEEATEDPAE PAATGADYSA VLDSHGGLTV DAVTTLSGSD LYDLLMSKGF EYDASYGEYV CYYEPFQAFA VSVDGSTVLD ESGMRSLSIG GAGDPVVYVI AAYDYGDDLN GAYDAIVGDS ASDKLVLDEE TIVAKVENEG GKYFVMAMNS EGDLGPTFAV VSEEAISSGV FYTWTGLDTS FGSTVDELYG SFTSQA
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