Gene Shel_06660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06660 
Symbol 
ID8394558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp778155 
End bp779315 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content60% 
IMG OID644985428 
Producthypothetical protein 
Protein accessionYP_003143074 
Protein GI257063402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGCC CTAACTGCGG TGCCGAGCTC AAGGAAGGCG CGGCGTTTTG CATCCAATGC 
GGAACGCCTG TGAGCAGCGC GGCCCCCACC CAGCCTACTC AACCCGCTCA GCCCACCATG
CCGGTCCAGC AACCGACCGT TCCGGTTTCT GCACCCGCGA CTCCCGCTGC GGCTCCCACG
CAGCCGGTCC AGCCTGCATA TCAGCCGACG GCGCAGCAGC CCTTCGTGCC TCAGCAGGAT
CCCTATGCGC AGCAGACCCA GGCGTATGCT CCTGCCCAGG ATCCCAATGT CCAGCAACAG
CCCTTTGCGC CTCAACAGGC GCCTTATCAG AATCAGGCGC CGTACCAAAA CCAGAAATCC
GGTGGAAAGC GCACCGGTCT GATCATCGGC GGCATCGCCG CTGTGCTTCT GCTCATCCTG
GGTGGCGTGG GCATCGCCGG CGTGTTGTCT GGCGGCGATG ACAAAGTCGC AGATGAAAAG
CCCGCCGCCA CGACTGAGAA AGCAACGGAA ACGGAAGAGG AGGCCGGTGC TGCGACAGAG
ACTGAAGCCC CCGCGCAGGA AGAGGCCACT ACCGAAGAGG CTACGGAGGA CCCCGCAGAA
CCTGCAGCAA CAGGGGCCGA CTACTCTGCC GTGCTTGATT CCCATGGCGG CCTGACCGTC
GATGCCGTTA CCACGTTGAG CGGGTCGGAC CTGTATGACC TGCTTATGTC GAAGGGATTC
GAATACGACG CGTCGTACGG CGAGTATGTG TGCTATTACG AACCGTTCCA GGCTTTTGCA
GTCAGCGTTG ATGGTTCGAC TGTTCTGGAC GAAAGCGGTA TGAGGTCGTT GTCCATCGGT
GGTGCGGGCG ACCCTGTCGT GTACGTCATT GCTGCGTATG ACTACGGAGA CGACCTGAAC
GGTGCTTACG ATGCAATCGT CGGCGACAGC GCCAGCGATA AGCTGGTTCT CGACGAAGAA
ACGATTGTTG CAAAGGTCGA GAACGAAGGC GGCAAATACT TCGTGATGGC CATGAACTCC
GAAGGCGACC TTGGTCCGAC TTTCGCCGTT GTGAGCGAGG AGGCCATCTC TTCCGGTGTG
TTCTACACCT GGACCGGCCT CGATACCAGC TTCGGTTCGA CGGTTGACGA GCTTTACGGC
AGCTTCACGA GCCAGGCATA A
 
Protein sequence
MNCPNCGAEL KEGAAFCIQC GTPVSSAAPT QPTQPAQPTM PVQQPTVPVS APATPAAAPT 
QPVQPAYQPT AQQPFVPQQD PYAQQTQAYA PAQDPNVQQQ PFAPQQAPYQ NQAPYQNQKS
GGKRTGLIIG GIAAVLLLIL GGVGIAGVLS GGDDKVADEK PAATTEKATE TEEEAGAATE
TEAPAQEEAT TEEATEDPAE PAATGADYSA VLDSHGGLTV DAVTTLSGSD LYDLLMSKGF
EYDASYGEYV CYYEPFQAFA VSVDGSTVLD ESGMRSLSIG GAGDPVVYVI AAYDYGDDLN
GAYDAIVGDS ASDKLVLDEE TIVAKVENEG GKYFVMAMNS EGDLGPTFAV VSEEAISSGV
FYTWTGLDTS FGSTVDELYG SFTSQA