Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_06530 |
Symbol | |
ID | 8394545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 764166 |
End bp | 764900 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644985415 |
Product | hypothetical protein |
Protein accession | YP_003143061 |
Protein GI | 257063389 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.755696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.477491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGGCA GAATCTTCAT TACAGGCGAT ACGCACGCGA CCGTGGATAT GCGAAAACTG AATTCCAAGC TGTTTCCTTT AGGGAAGACG CTGGATGCGG ATGACTACGT CATCATCTGT GGCGATTTCG GCGTCGTATG GGCGAACGAC AACACGGACA AATACCTCCT TAACTGGTAT CAAGCGAAGC CGTGGACAAC CTTGTTCGTT GACGGCAATC ATGAGAATTT CGATTTGTTG GATGCCATTG CACCAAGGAA CTGGCATGGC GGTATGGTTC ACGAGCTTCG TCCCAAGGTG CTCCATCTGA TGCGTGGCCA GATGTTCGAC ATCCACGGCA GGTCGTTTTT CTGCATGGGC GGAGCAACTT CGATAGACAA GGCCTTCCGT ACGGAGGGCA AGAGCTGGTG GCCCCAGGAA GTGCCGTCTC TCGATCAGCG CGATACAGCT TTGGCATCGC TTGAGCGGGC GGGATGGAGA GCCGATTATG TGCTGACGCA TTGCGCTCCT TCAGGCGTGC AATACCGCCT CAATCCGTAC TTCAGCTTCG ATGTGGTTAC AGACTTCCTG CAGGGCATTG AAGAACGGTT GGACTATCGC CATTGGTTCT TCGGGCATTA CCATGAAGAC CGAACTGTTG GTGAACGCTG GACTTGCGTG TACTACGACA TCTTGGAAAT CGAGTTGGGG GATGACGCGT CCGCTGACCG CATAGCGCCC GCAGGGCGTC GATAG
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Protein sequence | MAGRIFITGD THATVDMRKL NSKLFPLGKT LDADDYVIIC GDFGVVWAND NTDKYLLNWY QAKPWTTLFV DGNHENFDLL DAIAPRNWHG GMVHELRPKV LHLMRGQMFD IHGRSFFCMG GATSIDKAFR TEGKSWWPQE VPSLDQRDTA LASLERAGWR ADYVLTHCAP SGVQYRLNPY FSFDVVTDFL QGIEERLDYR HWFFGHYHED RTVGERWTCV YYDILEIELG DDASADRIAP AGRR
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