Gene Shel_06530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06530 
Symbol 
ID8394545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp764166 
End bp764900 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content54% 
IMG OID644985415 
Producthypothetical protein 
Protein accessionYP_003143061 
Protein GI257063389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.755696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.477491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGCA GAATCTTCAT TACAGGCGAT ACGCACGCGA CCGTGGATAT GCGAAAACTG 
AATTCCAAGC TGTTTCCTTT AGGGAAGACG CTGGATGCGG ATGACTACGT CATCATCTGT
GGCGATTTCG GCGTCGTATG GGCGAACGAC AACACGGACA AATACCTCCT TAACTGGTAT
CAAGCGAAGC CGTGGACAAC CTTGTTCGTT GACGGCAATC ATGAGAATTT CGATTTGTTG
GATGCCATTG CACCAAGGAA CTGGCATGGC GGTATGGTTC ACGAGCTTCG TCCCAAGGTG
CTCCATCTGA TGCGTGGCCA GATGTTCGAC ATCCACGGCA GGTCGTTTTT CTGCATGGGC
GGAGCAACTT CGATAGACAA GGCCTTCCGT ACGGAGGGCA AGAGCTGGTG GCCCCAGGAA
GTGCCGTCTC TCGATCAGCG CGATACAGCT TTGGCATCGC TTGAGCGGGC GGGATGGAGA
GCCGATTATG TGCTGACGCA TTGCGCTCCT TCAGGCGTGC AATACCGCCT CAATCCGTAC
TTCAGCTTCG ATGTGGTTAC AGACTTCCTG CAGGGCATTG AAGAACGGTT GGACTATCGC
CATTGGTTCT TCGGGCATTA CCATGAAGAC CGAACTGTTG GTGAACGCTG GACTTGCGTG
TACTACGACA TCTTGGAAAT CGAGTTGGGG GATGACGCGT CCGCTGACCG CATAGCGCCC
GCAGGGCGTC GATAG
 
Protein sequence
MAGRIFITGD THATVDMRKL NSKLFPLGKT LDADDYVIIC GDFGVVWAND NTDKYLLNWY 
QAKPWTTLFV DGNHENFDLL DAIAPRNWHG GMVHELRPKV LHLMRGQMFD IHGRSFFCMG
GATSIDKAFR TEGKSWWPQE VPSLDQRDTA LASLERAGWR ADYVLTHCAP SGVQYRLNPY
FSFDVVTDFL QGIEERLDYR HWFFGHYHED RTVGERWTCV YYDILEIELG DDASADRIAP
AGRR