Gene Shel_06460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06460 
Symbol 
ID8394538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp752303 
End bp753622 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content59% 
IMG OID644985408 
Productgalactokinase 
Protein accessionYP_003143054 
Protein GI257063382 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCC TCGGCGATGC ATACCGGGCT GCCCACGCGC AGGATTCTTC ATTGGGATAC 
GGCCGTTTTC ACGTTGCCCA GGTGTTCGCG CCTGGCAGAA CAGAGCTGGC AGGAAACCAT
GTAGACCACC AGAACGGCGT AGTGCTCACA GGAACACTCG AGCTGGGCAT TCGCGGTCAG
GCTGCCGAGA ACGGCACCGA TACCGTGCAC ATAGAAAGCT CGGGGTATCC AGCCTTCGAA
ATCTTGTTGG ATGACGTTCG CACCGGCCGC ATCGAGCTGG ATTGGACGCC AGGCACGCCC
ATCGACGCCA ACCAATCGCG GGCGCTTGCC ATAGGCGTGC TCGCCGGTTT CATACATGCG
GGATTCGATA TGCGAGGCTT CGACCTGCAG CTTGAAGCAG ACCTTCCGTC CGGCAGCGGG
CTTTCCTCGT CGGCAGCCTT CGAACTTGCA ATCGCAAGCG TCTGCAATCT GTTCTTCTCG
GGCAACCGGA TTCCGCCGGA GAAGCTCGCG CTTTTAGCTC AATCTGCAGA ACGCGATTAC
CTGGGCAAGC CTTGCGGCCT CATGGACCAA ATGGCCATCG CCTGTGGCGG ATTGGTTGCC
ATGGATTTTG CAAACCCGAC GAACCCGCAG GTCAAATCCA TTGCCGCTAA GTTCGCATCC
TTCGGCTACG ACCTTTGCCT TGTAAACGTG GGTGCAGACC ACAGCGCATT TGTGGAAGAA
TACGCCCAGG TGCCTGCGGA CATGCACAAC GTCGCCTCGT TCCTTGGAGG CACCACGCTT
CGCGACGTGC CGCGAGCGAC GCTGTATGAC CATCTGGACG ACGTCCGTTT CGCACTGGGA
GACGGAGCCT TGCTTCGCGC CATGCACTAC TACCGCGAAT GTGATTTGAC CCGCAAACGA
ATCCAAGCCC TCGAGCAGGG TGATTTCGAC GCATTCCTGC GCTGCACAGC CCTGTCTTCG
GCCTCGTCGG CCCAGTATCT GCAGAACGTA TCCGTCCCAG GCGCCAACCA ACCTGCCATG
GTGGCCTTGG CCTTTGCAGA CCAAGTCCTC GACGACCTGG CATGGGCCGA CGCCGATAAG
CCCAGGAGCT TCTCATCCCT CGCCAGCGCG CTCGGAAGCA GGAACTCATC TGCAAGCCAA
CCCGAAATCC GCCGCGGCGT CTGCCGCATC CACGGTGGAG GTTTCGGGGG TTCCATACAA
GTTTTCGTCC CCAGAGAGCA AACCGCCCAG TTTGCCGCTA TTATGGATGG ACACTTTGGC
GCAGGCGCAT GTCTTGTCGC CCGTATAACG ACCGAAGGAA GCCACGCATG GTGGAAGTAA
 
Protein sequence
MSSLGDAYRA AHAQDSSLGY GRFHVAQVFA PGRTELAGNH VDHQNGVVLT GTLELGIRGQ 
AAENGTDTVH IESSGYPAFE ILLDDVRTGR IELDWTPGTP IDANQSRALA IGVLAGFIHA
GFDMRGFDLQ LEADLPSGSG LSSSAAFELA IASVCNLFFS GNRIPPEKLA LLAQSAERDY
LGKPCGLMDQ MAIACGGLVA MDFANPTNPQ VKSIAAKFAS FGYDLCLVNV GADHSAFVEE
YAQVPADMHN VASFLGGTTL RDVPRATLYD HLDDVRFALG DGALLRAMHY YRECDLTRKR
IQALEQGDFD AFLRCTALSS ASSAQYLQNV SVPGANQPAM VALAFADQVL DDLAWADADK
PRSFSSLASA LGSRNSSASQ PEIRRGVCRI HGGGFGGSIQ VFVPREQTAQ FAAIMDGHFG
AGACLVARIT TEGSHAWWK