Gene Shel_05800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05800 
Symbol 
ID8394472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp676809 
End bp677708 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID644985342 
Producthypothetical protein 
Protein accessionYP_003142988 
Protein GI257063316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC ATGCACATTG GGACAAAGGG GACAGTCCCC TTTGTCCCAT TTTTGCAGCG 
GCGCTGGCAA CGTGCACGCT GCTGTTCGGT TGCGCCGCGC ATGCCGAAAA CACCTTTGAC
GCGGCAACTT TCGACCCCGT TTTCGAACAG GTGCTGCAGC GTGCAGAAAC CGTCGCAGCC
AACCGCCAAT CCGCTTCGCA CATCGACTTG CCAAGCACCG CCGAGGCAGT ATCCGACCGC
ATGCCCCAGC CGCCGTTACC GGATTTGGCC AGCCTGCCGG CGGGCACCCA GCTTTCCGCC
GACCAGGTGG CCGCATACGG CGAGGACGCC TGCTTCTACG TGACGGAAAT CGACGATGCC
CTGTTCCAGC GCATGTACGG CCTTTCCTAC AAGGAGGATT GCGCCGTGCC GCGCGAGGAC
CTTCGCTACA TCCGCGTGCT GCACGTGGAC ATCGAAGGGC GCATCCTCAT CGGTGAGCTG
GTCATGAACG CGGCCGTGGC CGACGATGTG TGCGGCATAT TCCACGAGCT GTACCGCGCG
GGCTACCCCA TCGAGAAGAT GCACCTGGTG GACGACTACG GCGCCGACGA CGACGCGTCC
ATGGAAGACA ACAACACCTC GGCGTTCAAC TTCCGTGTCA TACCCGGCAC GACGGTCATG
TCATACCACG CGCAGGGGCT AGCCATCGAC ATCAACCCCT ACTACAACCC CTATGTGAAG
GTGGCCCAGG GCTCCATCGC GCCGGCCTCC GCCGCGCAGT ACGCCGACCG CAGCCGCGAC
TTCGACTACA AGATCAACCG CGGCGATTTA TGCTTCCAGC TGTTCGCCGA GGCGGGCTTC
GTCTGGGGCG GCGACTGGAC CGACCCCATC GACTACCAGC ACTTCGAGTA CCACCTGTAG
 
Protein sequence
MPKHAHWDKG DSPLCPIFAA ALATCTLLFG CAAHAENTFD AATFDPVFEQ VLQRAETVAA 
NRQSASHIDL PSTAEAVSDR MPQPPLPDLA SLPAGTQLSA DQVAAYGEDA CFYVTEIDDA
LFQRMYGLSY KEDCAVPRED LRYIRVLHVD IEGRILIGEL VMNAAVADDV CGIFHELYRA
GYPIEKMHLV DDYGADDDAS MEDNNTSAFN FRVIPGTTVM SYHAQGLAID INPYYNPYVK
VAQGSIAPAS AAQYADRSRD FDYKINRGDL CFQLFAEAGF VWGGDWTDPI DYQHFEYHL