Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_05790 |
Symbol | |
ID | 8394471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 675966 |
End bp | 676700 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985341 |
Product | hypothetical protein |
Protein accession | YP_003142987 |
Protein GI | 257063315 |
COG category | [S] Function unknown |
COG ID | [COG4200] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.782546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACCT CTGCAATCCG GGCCGAGCTG ATCAAACTCA GGCGAGCTCC CATCTGGGTG GCGTTCGTCG CGCTGCCGCT CATCGCTGCG GCCATCGGCA CGTTCAATTA CGAAAGCAAC ATCGAGATTC TGCAGCTCGG TTGGCTGGAT CTATGGACGC AGCACACGTT GTTTTTGAGC ATGTTCTTCC TTCCGGCTTT GGTGGGCGCT TCGTGTTCGT GGCTCATGCG GCTGGAGCAT TCCGGCGGCA ACTGGAACCT GCTGGTGGCG TCGCCTGTCG GCGTGATGCG GCTGATTCTT GCGAAACTGC TGGTCGGATG GCTCATGTTG GGAGTTGGCC TTGTTGCAGT GGGTGCGCTC TTCGTGGGCT TCGGCAAGCT GGCGGGCATG TCCGGCATGC CTGATGCGCA GTATGCCGTG TGGCTGCTGT TCGCCTGGGT GGGCGGTATT GCGTGCGTTG CGTGGCAGTT GTTCTTCTCG TTGGTCATTC GCAGCTTCGC AGCGCCGGTC GGCATTGCGG TCGCAGGCGG TCTTGCAGGT TTCTTCATGT ATGCCCGTGG AATTTGGTTC GCATGTCCGT ATTCCCTCAT GACCAGGGCT TTGAACAGCA ATGGTATTGA AGCTTTGACT TCGGGCGATG CCGTCGTGCT TGTGGTGGTG GCGGTTTTGT ACACGGCTGT CGCGGTAGGC TCGTCGGTGT TCCTCCTCTC GAAAAGCGAC GTTCGCGGCG CGTAA
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Protein sequence | MRTSAIRAEL IKLRRAPIWV AFVALPLIAA AIGTFNYESN IEILQLGWLD LWTQHTLFLS MFFLPALVGA SCSWLMRLEH SGGNWNLLVA SPVGVMRLIL AKLLVGWLML GVGLVAVGAL FVGFGKLAGM SGMPDAQYAV WLLFAWVGGI ACVAWQLFFS LVIRSFAAPV GIAVAGGLAG FFMYARGIWF ACPYSLMTRA LNSNGIEALT SGDAVVLVVV AVLYTAVAVG SSVFLLSKSD VRGA
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