Gene Shel_05660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05660 
Symbol 
ID8394458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp658922 
End bp659668 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content54% 
IMG OID644985328 
Producthypothetical protein 
Protein accessionYP_003142974 
Protein GI257063302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.643233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACGA GCAAAGTACT CGCTGTCATT GTCGCGTGCC TTCCGGCTGC TTCTCTCGTA 
CCGTCGCAAG CACTGTTCAG TGCGGGTTTG GCTTCGGTCG AGGAACTCGC TTCGACCAAA
ATCGATGGCG CAATCGCCTA CGTCCCCGTC GAGGGTGATG GAAGCGAAAA CGCCGGTTGG
ACAGATGCCG CCGATGTGAG CGGAGACGCT GCAGAGGATC CAGAAGAAAC AATACCCGAA
TGTCCCCCGG ATGATTCTCA AGCGGAATTG GTGGAAAGCG TTCTGGCCGA ACAAGAATCG
GATGATTCTG TGATACTGGA CGAATCTGTC GATACGCAAT CTATTACATA TGAAGACGAT
GCCATCTTGG CTACTGCGAC TGCTCCCGTT GGCGTGCTGC CGGTGGGCAC ATCGTTGTCG
GTAATGGAGG TCTTGCCGAC CGATGCCGAT ACTGCTGACG CGTATAAAAA AAAGCTTAAA
GACGGTGCTG GGAATGATAA CAGCAAGTAT CTGGTTATCT TTACCGACGG CAAGAACCAC
CTGAACGTCC AGGTTGGCGA GGGTGTTGTC GAAAACACCA TGATTTACGA ACTTCCGGCT
GCCGGCGGAC CGGGTGTGTA CCCGTTCCTC CTGGTGGGAG CCTTTGTTTC TACGTTCATG
GCGTGGGCAG TCCGCGACAA ACATCGCAGA TACGCCACCG CCTCTAGACG CTTTGCGTTA
GCAGGCGTAA TCGAAGGCGG TGATTGA
 
Protein sequence
MKTSKVLAVI VACLPAASLV PSQALFSAGL ASVEELASTK IDGAIAYVPV EGDGSENAGW 
TDAADVSGDA AEDPEETIPE CPPDDSQAEL VESVLAEQES DDSVILDESV DTQSITYEDD
AILATATAPV GVLPVGTSLS VMEVLPTDAD TADAYKKKLK DGAGNDNSKY LVIFTDGKNH
LNVQVGEGVV ENTMIYELPA AGGPGVYPFL LVGAFVSTFM AWAVRDKHRR YATASRRFAL
AGVIEGGD