Gene Shel_05300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05300 
Symbol 
ID8394422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp615631 
End bp616380 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content57% 
IMG OID644985292 
Producthypothetical protein 
Protein accessionYP_003142938 
Protein GI257063266 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGC ATGAATTCGG ACAGAAAAAC GAAAAGGTCG TGGTCCTTAT CCACCCCTCG 
ATGGTGGCGT GGGATTATTT CGAGCGGGTT ATCCCTTTGC TCGAGGATGA ATTCCGCGTG
ATGGTGCCGG CGGTGCCTGG CATGGACCTG ACCGACGACT CGGAGTTCAC ATCCGTCGAG
GCCATCGCGA CGGATCTCGA AAACTACCTT TTGAACAGGG GCATTCGTGA CGTGCGCGCG
TTGTACGGGT GCTCCATGGG TGGAAGCATG GTGCTGCGCA TGGCCGCCAA CGGCCGTCTG
AACGTGGCCC ACTACATTAT GGACGGCGGC ATCACGCCGT ACCAGCTGCC CAGGATTTTG
ACCCGGTTCA TCGCGGTCCG AGACTTCTGC ACGATTTACT CCGGCAAGCT CGTGAGCGAA
AAGATGCTCA TGCGGGCGTT CAGCTCCACA GAGTACAGCG ACGAGGATGT CAAATACATC
GCAAACGTGC TCAAGCACTG CACCGCGAAA ACCATCTGGC GGGTTTTCGA TTCCTGCAAC
AATTTCGCGA TGCCTAAGGA GCCGATGCGT TTCGACGGTG TCATGCACTA TTGGTTCGGC
GAAGGGGAGC GGAAGGCCCG CGACTGGGAC ATCAAATACA TGCGGAAATT CGTTCCCGAC
ACGATGTTTC ATGAGATGAA GGGCGTCGAC CACGGTGATT TCGCATACTT CCAGGCCGAG
CGGCTGGCCG AGGCCATTCG GCAGCTGTAG
 
Protein sequence
MNVHEFGQKN EKVVVLIHPS MVAWDYFERV IPLLEDEFRV MVPAVPGMDL TDDSEFTSVE 
AIATDLENYL LNRGIRDVRA LYGCSMGGSM VLRMAANGRL NVAHYIMDGG ITPYQLPRIL
TRFIAVRDFC TIYSGKLVSE KMLMRAFSST EYSDEDVKYI ANVLKHCTAK TIWRVFDSCN
NFAMPKEPMR FDGVMHYWFG EGERKARDWD IKYMRKFVPD TMFHEMKGVD HGDFAYFQAE
RLAEAIRQL