| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05010 |
|---|
| Symbol | |
|---|
| ID | 8394393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 589546 |
|---|
| End bp | 590157 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644985264 |
|---|
| Product | putative cell wall binding protein |
|---|
| Protein accession | YP_003142910 |
|---|
| Protein GI | 257063238 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGTGTTC GCAAGGCGTA TGCGGCATCT GACAAGGGCT TCGGCTACGT TGAAGGTCAG
CTATCCATTC CCGCAACGCT CAAGGATCTG AAGGCGCAGG CCGCCGGCGA TACGCTTACC
GTCACGTGGG CCGCTCCGCA GTCCGAATTC AACGTGCCTG ATTCCGCTTC TTACACCGTT
GAGCTGCTGA AAGACGGCGC TGTGGCGAAA ACCGTCGTGG TGGACGCTGC CGAAGGCACA
GCCAAGGCCG AGTTCTCCGG GCTCGCAAAG GGCGACTACA CCGTGAAGGC GTTCGCAACG
AACATCGTCG GACGCAGCGA CAAGGTGTCC GTCCAGGCGC ATGTGCCCGG TAAGGCGGCG
ACCCCCGAGA ACGGTTGGGC AAAGCAGGAC GGCGTATGGT ACTACTTCAA GAACGGCGCC
AAGGCCACAG GCTGGCAGAA GGTGGGCAAC GACTGGTACT ACTTCGCCGG CAGCGGCGCC
ATGAAGACCG GATGGCTGAA GGTCGGCGGC AGCTGGTATT ACCTGAAGTC CTCGGGCAAG
ATGGCCACGG GCTCCCAGGT GATCAACGGC AGGGCGTACT ACTTCGCCTC CAACGGCGTG
TGGCGCGGAT AG
|
|---|
| Protein sequence | MGVRKAYAAS DKGFGYVEGQ LSIPATLKDL KAQAAGDTLT VTWAAPQSEF NVPDSASYTV
ELLKDGAVAK TVVVDAAEGT AKAEFSGLAK GDYTVKAFAT NIVGRSDKVS VQAHVPGKAA
TPENGWAKQD GVWYYFKNGA KATGWQKVGN DWYYFAGSGA MKTGWLKVGG SWYYLKSSGK
MATGSQVING RAYYFASNGV WRG
|
|---|
| |