Gene Shel_04510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04510 
Symbol 
ID8394343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp535217 
End bp535759 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID644985214 
ProductRNA:NAD 2'-phosphotransferase 
Protein accessionYP_003142860 
Protein GI257063188 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1859] RNA:NAD 2'-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.350174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000275449 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGATC CGCGTTTGGA CGCCATAAGC CGGCACTTGA GCTATCTGCT GCGGCACCAT 
CCCGAAGCCG CCGGCCTCCA TATGGACGAG CACGGCTGGG TGCGGGTGGA CGAATTGGTC
GCGGCCGTCG CCCAGAAGCA CAGCTTCGAC CAGACGACGC TTGAGAGGAT CGTCGCCACC
GACAAGAAGG GTCGGTATTC CTTCAACGAG GACCGTACGC TCATCCGGGC CAACCAGGGC
CATTCCATTC CCGTGGATGT GGAGCTTGCA TGCGTAACGC CTCCCGACCG GCTGTTCCAT
GGGACGGCGA CGCGGTTCGC GGAATCCATC GAGCGCCAGG GCCTCCTGCC GCAGAACCGC
CTGTATGTGC ATCTGTCGCC CGACCCCGAA ACCGCCATGG TCGTTGGCGC GCGCCACGGC
AAGCCCATGG TGTACGTCGT CGACGCCAAG GCCATGTCCG CGGCGGGGCA CAGGTTCTTC
CTGTCCGTCA ACGGGGTCTG GTTGGTGAAA ACGGTTCCGC CCGAGTATTT GACGCGGATG
TAG
 
Protein sequence
MPDPRLDAIS RHLSYLLRHH PEAAGLHMDE HGWVRVDELV AAVAQKHSFD QTTLERIVAT 
DKKGRYSFNE DRTLIRANQG HSIPVDVELA CVTPPDRLFH GTATRFAESI ERQGLLPQNR
LYVHLSPDPE TAMVVGARHG KPMVYVVDAK AMSAAGHRFF LSVNGVWLVK TVPPEYLTRM