Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04510 |
Symbol | |
ID | 8394343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 535217 |
End bp | 535759 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644985214 |
Product | RNA:NAD 2'-phosphotransferase |
Protein accession | YP_003142860 |
Protein GI | 257063188 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1859] RNA:NAD 2'-phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.350174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000275449 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGATC CGCGTTTGGA CGCCATAAGC CGGCACTTGA GCTATCTGCT GCGGCACCAT CCCGAAGCCG CCGGCCTCCA TATGGACGAG CACGGCTGGG TGCGGGTGGA CGAATTGGTC GCGGCCGTCG CCCAGAAGCA CAGCTTCGAC CAGACGACGC TTGAGAGGAT CGTCGCCACC GACAAGAAGG GTCGGTATTC CTTCAACGAG GACCGTACGC TCATCCGGGC CAACCAGGGC CATTCCATTC CCGTGGATGT GGAGCTTGCA TGCGTAACGC CTCCCGACCG GCTGTTCCAT GGGACGGCGA CGCGGTTCGC GGAATCCATC GAGCGCCAGG GCCTCCTGCC GCAGAACCGC CTGTATGTGC ATCTGTCGCC CGACCCCGAA ACCGCCATGG TCGTTGGCGC GCGCCACGGC AAGCCCATGG TGTACGTCGT CGACGCCAAG GCCATGTCCG CGGCGGGGCA CAGGTTCTTC CTGTCCGTCA ACGGGGTCTG GTTGGTGAAA ACGGTTCCGC CCGAGTATTT GACGCGGATG TAG
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Protein sequence | MPDPRLDAIS RHLSYLLRHH PEAAGLHMDE HGWVRVDELV AAVAQKHSFD QTTLERIVAT DKKGRYSFNE DRTLIRANQG HSIPVDVELA CVTPPDRLFH GTATRFAESI ERQGLLPQNR LYVHLSPDPE TAMVVGARHG KPMVYVVDAK AMSAAGHRFF LSVNGVWLVK TVPPEYLTRM
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