Gene Shel_03680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03680 
Symbol 
ID8394260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp439647 
End bp440297 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID644985133 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003142779 
Protein GI257063107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCC CGCGCAACAT GGAACTTTAC GGCACAGTCA AACGCGAGGC GTATCGGCAG 
CTGCTGTCGC GGGGCTACCA GGAGACCACC TACCAGTCCA TCGCGTCCGG GTGCGGCATC
ACGCGTGTGG CGGTGCAGAA CTATTTCCCC TCCAAGCTGG ATTTGGCGCT GGCGTTTTTC
GACGACCTGC TGAGCGCGCT GCACAGGGCC ATTCTTGACG AGGGCATCCA CCAGGAGAAC
GAATTCGACT TCATGTACTG CATCGGCCAG GGGTTTTTCG CGTTTTTGCT GAAGGACGAG
GGGAGCCGCA GGCTGCTTTT GGACCTCACG TCCAGCCGGG AGCTTACGAG CCAGATCCTG
CTGTTCGAAT ACCGGTGGGG CGAGGATTTC ATAACCGAGC AGCGGACGGT TTCCCAGGAG
AAGTTCCAAA ACGACACCAC TGTATCCATG GGCGGCTTTT ACGAGCTGCT ATACCGGTGC
CTGAAGGACG ACAAGCCGTT TGACCTGGCT GTTCATCTGG GGCGCGTGGT GCGCACAATC
ATGCACGACT ACGGCTACGG GTACGAGGAG GCCAAAGCGT TTGTGGCCGC GCACGCCATG
ACCGAGGATG AAAAGTCGCG CGTCGTCCAG GTCGTTTCGG AGGAGCTGTA G
 
Protein sequence
MARPRNMELY GTVKREAYRQ LLSRGYQETT YQSIASGCGI TRVAVQNYFP SKLDLALAFF 
DDLLSALHRA ILDEGIHQEN EFDFMYCIGQ GFFAFLLKDE GSRRLLLDLT SSRELTSQIL
LFEYRWGEDF ITEQRTVSQE KFQNDTTVSM GGFYELLYRC LKDDKPFDLA VHLGRVVRTI
MHDYGYGYEE AKAFVAAHAM TEDEKSRVVQ VVSEEL