Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_03680 |
Symbol | |
ID | 8394260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 439647 |
End bp | 440297 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985133 |
Product | transcriptional regulator, tetR family |
Protein accession | YP_003142779 |
Protein GI | 257063107 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCC CGCGCAACAT GGAACTTTAC GGCACAGTCA AACGCGAGGC GTATCGGCAG CTGCTGTCGC GGGGCTACCA GGAGACCACC TACCAGTCCA TCGCGTCCGG GTGCGGCATC ACGCGTGTGG CGGTGCAGAA CTATTTCCCC TCCAAGCTGG ATTTGGCGCT GGCGTTTTTC GACGACCTGC TGAGCGCGCT GCACAGGGCC ATTCTTGACG AGGGCATCCA CCAGGAGAAC GAATTCGACT TCATGTACTG CATCGGCCAG GGGTTTTTCG CGTTTTTGCT GAAGGACGAG GGGAGCCGCA GGCTGCTTTT GGACCTCACG TCCAGCCGGG AGCTTACGAG CCAGATCCTG CTGTTCGAAT ACCGGTGGGG CGAGGATTTC ATAACCGAGC AGCGGACGGT TTCCCAGGAG AAGTTCCAAA ACGACACCAC TGTATCCATG GGCGGCTTTT ACGAGCTGCT ATACCGGTGC CTGAAGGACG ACAAGCCGTT TGACCTGGCT GTTCATCTGG GGCGCGTGGT GCGCACAATC ATGCACGACT ACGGCTACGG GTACGAGGAG GCCAAAGCGT TTGTGGCCGC GCACGCCATG ACCGAGGATG AAAAGTCGCG CGTCGTCCAG GTCGTTTCGG AGGAGCTGTA G
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Protein sequence | MARPRNMELY GTVKREAYRQ LLSRGYQETT YQSIASGCGI TRVAVQNYFP SKLDLALAFF DDLLSALHRA ILDEGIHQEN EFDFMYCIGQ GFFAFLLKDE GSRRLLLDLT SSRELTSQIL LFEYRWGEDF ITEQRTVSQE KFQNDTTVSM GGFYELLYRC LKDDKPFDLA VHLGRVVRTI MHDYGYGYEE AKAFVAAHAM TEDEKSRVVQ VVSEEL
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