Gene Shel_03600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03600 
Symbol 
ID8394252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp432473 
End bp433489 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content58% 
IMG OID644985125 
Productuncharacterized conserved protein, contains double-stranded beta-helix domain 
Protein accessionYP_003142771 
Protein GI257063099 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTA GAAACCAAGG CACCGACTTT ACCCAGCACG ACAGGCCGGA TTACTGCGAG 
CAGCCTTTCG TGTTCAACCA CGACAACAGC TACCTGGCCA AGTTCGACGA GTACACGCTC
GACCGGCCCG GATACGTGGC GTGGTTCAGC CACCCCGCAG GTCCGCTGCA GTCCGGCGAG
ATGAGCGATA CCGTGTATTA CAAGGGCGAC ACCGTGTCGT ACCACGAGCA CAACCACGGC
ATCGAGGTCT TCCTTATCGA CGCTGGTCGC GTCATGGTGT ACATGCGCGG GAAGAAGGCC
GAGGCCGCAG CGGGCGACAT CGTCTTCGTT CCGCCGTTCG TCTCCCACGG GTTCGACTAT
CTTGAGGACG AAACCGTCTG GCGCGAATGG TTCGCCCACA TCCGCATGAA CGAGGGAATG
CTGAAGGAGC GTCGCCTGCG CACGTTCGGC AATGTGGACC TGGACGACCC CAGCGTGAAG
CAGAAGCTCG CGCGGCACAA GGACCACACC AAGCTGACGT TCGTGACCGA GTTCGACCGC
GTGGACAAAG ACCAGATGCC GTTCATCAGG TCCTACGATT TCGCGTACGA CACGTTCAGG
TTCCCTGGTG TGGAAATGCT GCAGAAGATT GCCCGTCACG AGCTGGATGG CGAAAGCGAA
ATCTGGCAAT ACCGCATGGA CAAGGGATTC TCCATGGAGT GGAGCAAGTG GAATCCCCAC
GGGGTGGTTC TTGCCCTGTT CTCCGGATCG ATGGAGGTGA CCGTTGCAGG CCAGGAGCCG
TTCATCGTGA AGGCGCACGA CATCGTGAAC ATCCCGTCGT ATCTTTCCTG CCGCATCGAG
GCATTGGAGA ACAACACCGT GACGTTCGAT TATGCATGCA AAGGCCTCCA GTTCAGAGCG
CTTGAGCACG TGAGGGCTCT GCAGAACGAA GGCTCCGCAC TTTTGGATGA CAAGGAAGCG
GTTTGCGAGC TTCTTGAAGA CACGTACGAC GTGTACAGCT ATTGGAAGAT GCACTAA
 
Protein sequence
MQIRNQGTDF TQHDRPDYCE QPFVFNHDNS YLAKFDEYTL DRPGYVAWFS HPAGPLQSGE 
MSDTVYYKGD TVSYHEHNHG IEVFLIDAGR VMVYMRGKKA EAAAGDIVFV PPFVSHGFDY
LEDETVWREW FAHIRMNEGM LKERRLRTFG NVDLDDPSVK QKLARHKDHT KLTFVTEFDR
VDKDQMPFIR SYDFAYDTFR FPGVEMLQKI ARHELDGESE IWQYRMDKGF SMEWSKWNPH
GVVLALFSGS MEVTVAGQEP FIVKAHDIVN IPSYLSCRIE ALENNTVTFD YACKGLQFRA
LEHVRALQNE GSALLDDKEA VCELLEDTYD VYSYWKMH