| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_03130 |
|---|
| Symbol | |
|---|
| ID | 8394205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 381374 |
|---|
| End bp | 382342 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644985083 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003142729 |
|---|
| Protein GI | 257063057 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATAG AGAGAATGCG GGAGTTTGTA ACACTTGCGC ACACCATGAA CTTCACCAAA
GCCGCACGCA TCATGCATCT ATCTCAATCT GCGTTGAGCA ATCACATCAT GCAGATGGAA
AAGGAGCTCG GAGTTTCCCT TGTCGACCGA ACCACTCAAA AAATCCGGCT TACCGTGGCG
GGATACAATT TCCTAGAAAC CTCGTCCCTC ATCATTAATT CTTACGACAG TTTTCTGGAG
CGTCGCAGCA AAAACGAGTT CTCGGAGAAT AACCATATTG TCGTACAGAC CCTTCAGCAC
GCCGATCAGG CTACACATGT GCTTCTGACG CGGATACGGC AGTTTTGCGC GTTACATCCT
GACGTGCAGT TCGAGATTCG GGAATCGCTG TCGTTCGACG TAGTAAACAA CATCGAAGAT
GGAACAGTTG ATTGCGGACA TCTGGGTTTG TACCTGTCCG AACCCGAACC CATAGACAAC
ATCGACGTCT TTCCCATCGT CGACGAAGAA GTGGTGGTTT GGATTGATAA ATCTCTACCG
CAAGCAACTG CCGAACAGCT TTCTCCGCAA GACCTCGAGG GACTGGACAT GCCCACATGG
ACGGGGCTCG GTCACAACAG TTTTGAAAGC TTCCATCAAC AAATCAGCGA GATGTACGAC
ATGAACATCC GCTATGTGCC CCGATACTGC ATATCGCGCG AAGACTTTTT CCTCAACAAA
ATCACGTCGA ATGACGTGGT CCTGCTTACC ATGGGAAGCG AGAACATCCA CTCAATCGCA
GTGCGTGAAG ACCGCATCTT GCGCACGTTT GAGCCAACGA TTTACGAGCA CACGTGCATA
GCGTTTCGTG CAGACAAAAA CGAGAACTCG GCACTCGCGC TATTCGAACA GTTCATGCGT
GACGAATACG CCCGCGACCC CTACGGAGAA AACGTGCTCG GACAAAACTA CGCGAACCCC
GTAAAGTAA
|
|---|
| Protein sequence | MDIERMREFV TLAHTMNFTK AARIMHLSQS ALSNHIMQME KELGVSLVDR TTQKIRLTVA
GYNFLETSSL IINSYDSFLE RRSKNEFSEN NHIVVQTLQH ADQATHVLLT RIRQFCALHP
DVQFEIRESL SFDVVNNIED GTVDCGHLGL YLSEPEPIDN IDVFPIVDEE VVVWIDKSLP
QATAEQLSPQ DLEGLDMPTW TGLGHNSFES FHQQISEMYD MNIRYVPRYC ISREDFFLNK
ITSNDVVLLT MGSENIHSIA VREDRILRTF EPTIYEHTCI AFRADKNENS ALALFEQFMR
DEYARDPYGE NVLGQNYANP VK
|
|---|
| |