Gene Shel_03100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03100 
Symbol 
ID8394202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp378970 
End bp379608 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content50% 
IMG OID644985081 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003142727 
Protein GI257063055 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.688255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTA GAACCCTCGT TAAAGGCGTT ATTGCAATTG GTTCTTGCCT CATTTTTGCC 
GGCGTGACAC AGGCTATGCC TGCTCGTGCC GAAGAGGCTG CAAGCGGTCT TGTTGACGTT
CAGTACGGTT TCATGGTAAA CCGCAGAAAA TGCGTGGGCT GCAAGAACTG CGTTGCAGCA
TGCCGAAAAT ACAACAAACT GTCGGATGAT ACGCCCGATA GACGCAGGAT TACTGAGCGA
TTTGATTCGC ATGGAAAGAA ATACCGTGTT TCAACTTCAT GTATGCATTG CGACGATCCG
AACTGCATGC GGGTATGCCC TGCTGGTGCA ATAAGCAAGG TAGATGCGGG TATTGTTCAG
GTTGATAAGG ACCTCTGCAT AGGATGCAAG TATTGCTTCC AAGCGTGTCC TTACGAAGTT
CCGAGGTACA ACAGCGATTC GATGGATAAG TGCGATTGCT GCCTTGGCGC TGGGGTAAAG
CCAGGCGATC AGCCTTATTG CGTATCTGCT TGCAAATTCG GCGCGCTTTC CTATGGTCCC
ATTGACGACC TTGTCGCTGA GGCTGAGTCT CTTAACCATG AGGTCGTTCG TGTAGGTGAT
GCTTGCGAAC CGAACTGCTA CATTACTGGG GAGGTGTAA
 
Protein sequence
MARRTLVKGV IAIGSCLIFA GVTQAMPARA EEAASGLVDV QYGFMVNRRK CVGCKNCVAA 
CRKYNKLSDD TPDRRRITER FDSHGKKYRV STSCMHCDDP NCMRVCPAGA ISKVDAGIVQ
VDKDLCIGCK YCFQACPYEV PRYNSDSMDK CDCCLGAGVK PGDQPYCVSA CKFGALSYGP
IDDLVAEAES LNHEVVRVGD ACEPNCYITG EV