Gene Shel_02750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02750 
Symbol 
ID8394167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp332002 
End bp332649 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID644985046 
Productpredicted transcriptional regulator 
Protein accessionYP_003142692 
Protein GI257063020 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACG CCTACGATGA CAACATGCGG CCGAAAGCCC AGGCCACGCT CGGGTACGCC 
ATGGACTTCG CCGTAAACGA AGCAGGATAT CTCCCTCAAG ACTTCATGGC GCTGTTCATC
GAGTCGGGCC TTGCGCGCCG GTTCGAAAGC GGCGAGTCAG CCGTGATCAT GGGCATGAGC
GGAAACGAGC TCGCCCTGCG CGTGTTCGAG GAGACGGTCG GGCTGCAGCG CCCGCTTGCC
ATGCGCCCTC GCGAGCGCGG CAGCAAGGCG TACTGGATCG GCTGGGCGCT CGCCTATTTC
CAGTGGGAAA CGGGCCTCAC GTTCCGCGCC ATCCTAACGG CCGTGCCTAT GGAGGTCATC
GAGGACTTGT ACGGCGCATA CCACGAGATG AACGTCGAGC AGTTCGTGGA CCGCATGGTG
CAGCTGTATC GCCAGGCGAT GCCCGACACC AACCTGAAGC GGCTGCGCAA ACTCTCCGGC
CTCACGCAAG AGCAGCTGGC GCAGCTGTCC GGAATATCTG TGCGGACCAT CCAGCAGTAC
GAGCAGCGCC GCAAGGACGT GAACAAAGCC TCGCTGGAAA CAGCCGTCGC CATCGCCACC
GTGCTGCACT GCAGCCCCTC GGACTTGCTG GAGCGCATCG CCTCGTAA
 
Protein sequence
MIHAYDDNMR PKAQATLGYA MDFAVNEAGY LPQDFMALFI ESGLARRFES GESAVIMGMS 
GNELALRVFE ETVGLQRPLA MRPRERGSKA YWIGWALAYF QWETGLTFRA ILTAVPMEVI
EDLYGAYHEM NVEQFVDRMV QLYRQAMPDT NLKRLRKLSG LTQEQLAQLS GISVRTIQQY
EQRRKDVNKA SLETAVAIAT VLHCSPSDLL ERIAS