Gene Shel_01360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01360 
Symbol 
ID8394028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp169354 
End bp170499 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID644984909 
Producthypothetical protein 
Protein accessionYP_003142559 
Protein GI257062887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAC AGAAGCTGAT GACCAGCAAC GATTTTGAGA AAATCCGCGT GCTGGGAGGG 
AAAAAGGGTA CCAAGCGCAT CGGCAAGGTG AAGACCTGCG TGTTCCATCC ACGGGAGAAG
CGCTGCATCG GATTCATCGT GAAGCGGCCC GACGCCGCCA TGATGTTCCA TCGTAAAGAT
ATCTTCGTGC CGCTGGACGG CTATGATTTC GCCAACGGGC GCATCGTGAT TCATCCCGAT
GCGGAAACCT CAGGCGAGGC TTACTGCAAG AAACATGGCA TAGACTGGGA CCGCTGCATC
CTGTGGTCCG GCATGCCCAT GATTTCCGAA AACGGCGAAG AGCTGGGCTA CGTGGGCAAC
ATGACCTTCG ACGTAGAAAC CGGCGAGTTG ATTTCCGTGG TCGCGTCCAA CGGAGCCACG
GCGAAGTACC TGCTGGGCAC GCTGGAGGTG CCGGCCAGTT ACGTGAAGGG CTTCCGGACC
GGCATCGGCG CGGAGCTTTC CATCGGCGGC AACGCGGGTG GGGAAGAGGA AGAAGTGTTC
CACGGCGCCA TCCTGGTGTC CGACGACGTG TGGGAACTGG AGCCGGAGGG CGGCTGGGCG
GAATCCGCCG GCGAGGCCGT GGCGAAGGCG AAAGCCAAGG CCAAAGACGC GGCCGCCAGC
GTCAAGCCGC ATACGGATGC GGCCGTCGCA GCTGCAGGCG AGGCCATCAA CAAAGGCGCT
TATGCCACCG GCAAACAGAT AGCCGCCAGC AAAGGCATGT TCTCTGCGTT CAAGGACGAG
TTCCAGAAGG GCCGTGCCGG TGAGGCCAGC GAGCTGGAGG AAGAAGCAGA CGAGCCCGGC
ATGTTCGCGG CCTTCAAGCA GGAATTCGAC AAGGCCCGCG GCAACGAGCC GGAAGAACCC
GAGGAAGACG AATACGAGGA CGAAGACCTC GAATACGAAG AGGACGACAT CGAAGAGGAT
GACCTCGACG AAGACGAGGA CGAGGAATAC GACGCGGACG ATTCCGAGTA CGAGTACGAA
GTCGACGAGT ACGAAGACGA CGATGAGTAC GAAGAGGAAG AGCCCGAGCC GAAACCCGCG
AAGCCTTCCG CCAGGGGCAT GTTCGCAGCC TTCAGGGACG AATACAACAA GGCGTTGAAT
GAATAA
 
Protein sequence
MARQKLMTSN DFEKIRVLGG KKGTKRIGKV KTCVFHPREK RCIGFIVKRP DAAMMFHRKD 
IFVPLDGYDF ANGRIVIHPD AETSGEAYCK KHGIDWDRCI LWSGMPMISE NGEELGYVGN
MTFDVETGEL ISVVASNGAT AKYLLGTLEV PASYVKGFRT GIGAELSIGG NAGGEEEEVF
HGAILVSDDV WELEPEGGWA ESAGEAVAKA KAKAKDAAAS VKPHTDAAVA AAGEAINKGA
YATGKQIAAS KGMFSAFKDE FQKGRAGEAS ELEEEADEPG MFAAFKQEFD KARGNEPEEP
EEDEYEDEDL EYEEDDIEED DLDEDEDEEY DADDSEYEYE VDEYEDDDEY EEEEPEPKPA
KPSARGMFAA FRDEYNKALN E