Gene Shel_01100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01100 
Symbol 
ID8394002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp140410 
End bp140826 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content64% 
IMG OID644984883 
Product3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_003142533 
Protein GI257062861 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.695386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.474178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGGG AAGAAATTCA GCGCATCCTG CCGCATCGCC CGCCGATGCT GCTGCTAGAC 
GACGTGTCGG AGCGCGATGG CGTGGCGTTG GGCCATTACC ACGTGCGCGG CGACGAGTTC
TTCTTGCAGG GGCATTTCCC CGGCAACCCC ATGGTCCCGG GCGTCATCCT GTGCGAGATC
ATGGCGCAGT CCGCCTGCGC TTTGCTGGAA GACCGCATGT CCGAGGGCGC GCTGTTCGTG
TATGCGGGCA TCGACAAGGC GAAGTTCAAG AAGAGCGTCC TGCCGGGCGA CACCGTGGAG
GTGACCTGCA GCCTGAAGCG GGTCATCCAC CCGTTCTTCA TCGTGGATGC AGAGGCATCC
GTCGACGGGA ATCTGTGCGC GAGCGCCACG CTGACCCTGG CCTTGACGGA GGTCTAG
 
Protein sequence
MDREEIQRIL PHRPPMLLLD DVSERDGVAL GHYHVRGDEF FLQGHFPGNP MVPGVILCEI 
MAQSACALLE DRMSEGALFV YAGIDKAKFK KSVLPGDTVE VTCSLKRVIH PFFIVDAEAS
VDGNLCASAT LTLALTEV