Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_01100 |
Symbol | |
ID | 8394002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 140410 |
End bp | 140826 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644984883 |
Product | 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
Protein accession | YP_003142533 |
Protein GI | 257062861 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.695386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.474178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGGG AAGAAATTCA GCGCATCCTG CCGCATCGCC CGCCGATGCT GCTGCTAGAC GACGTGTCGG AGCGCGATGG CGTGGCGTTG GGCCATTACC ACGTGCGCGG CGACGAGTTC TTCTTGCAGG GGCATTTCCC CGGCAACCCC ATGGTCCCGG GCGTCATCCT GTGCGAGATC ATGGCGCAGT CCGCCTGCGC TTTGCTGGAA GACCGCATGT CCGAGGGCGC GCTGTTCGTG TATGCGGGCA TCGACAAGGC GAAGTTCAAG AAGAGCGTCC TGCCGGGCGA CACCGTGGAG GTGACCTGCA GCCTGAAGCG GGTCATCCAC CCGTTCTTCA TCGTGGATGC AGAGGCATCC GTCGACGGGA ATCTGTGCGC GAGCGCCACG CTGACCCTGG CCTTGACGGA GGTCTAG
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Protein sequence | MDREEIQRIL PHRPPMLLLD DVSERDGVAL GHYHVRGDEF FLQGHFPGNP MVPGVILCEI MAQSACALLE DRMSEGALFV YAGIDKAKFK KSVLPGDTVE VTCSLKRVIH PFFIVDAEAS VDGNLCASAT LTLALTEV
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