| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3900 |
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| Symbol | |
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| ID | 4457755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4751365 |
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| End bp | 4752039 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704673 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_848004 |
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| Protein GI | 116751317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.468952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.152326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGACC TTCTTTTCGT TCGCACCGAT GTCCTGCCCG CCTTCCTGAA GGGATTGAAA
GTCAGCCTTC TGCTCATCGC GCCGTCCGCT TTTTTCGGCC TGTGCATCGG CATCCTGGTG
GGGGCCTGCA GGGTTTACGG GAGCCGGCTC GTCATCCTGC TGAGCGACCT CTACGTCGCC
CTGTTCCGGG GTGTTCCCCT GGTGGTCCAG CTGTTTGTGT GGTACTTCGG GCTGCCGCAC
CTCAAAATCT ATCTTTCTCC CTTTGTGGCC TCCGTGCTGG GGTTTTCATT GTGCAGCGGG
GCCTACCACT CGGAATACAT CCGCGGCGCC TTGCTGTCCA TCCGCAAGGG ACAGATGCTC
GCCGCCCAGG CCCTCGGCTT TTCGAAGCTG CGCATGGTGC TCTCCGTCAT CCTGCCCCAG
GCGCTGCGCC GAGCCCTTCC CGGCTGCGGA AACGAAATCA TTTACCTCAT CAAGTATTCG
TCCCTGGCCT ACATGGTCAC TTGCATCGAG CTGACCGGAG AGGCGAAGAT CCTCGCTTCG
CACTCGTTCA AATACACCAT CGTCTTCTTG AGTGTCGGAA TCGTGTACCT GTTCCTCGTG
TCCCTGGCGA GCTGGCTGCT CCATCACATC GAGGACAAGG TGTCTCTGCC TGGATTCGAA
CAGCACAGGA CTTGA
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| Protein sequence | MEDLLFVRTD VLPAFLKGLK VSLLLIAPSA FFGLCIGILV GACRVYGSRL VILLSDLYVA
LFRGVPLVVQ LFVWYFGLPH LKIYLSPFVA SVLGFSLCSG AYHSEYIRGA LLSIRKGQML
AAQALGFSKL RMVLSVILPQ ALRRALPGCG NEIIYLIKYS SLAYMVTCIE LTGEAKILAS
HSFKYTIVFL SVGIVYLFLV SLASWLLHHI EDKVSLPGFE QHRT
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