Gene Sfum_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3869 
Symbol 
ID4457794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4721303 
End bp4722334 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content61% 
IMG OID639704642 
Producthypothetical protein 
Protein accessionYP_847973 
Protein GI116751286 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0151783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG GAAACGATTT CGATCCGGCC CGCTATGATT TTCGAGGGCT GCACCCGGAC 
CTGTGCATCG GAACCGCGAG CGATCGCTAC GCCGGGTGGA TCGGGCAGAT CTATTCTGCG
GAAAAGTACC GGGGCCGCAT CAGCAGGAGG GTCAACAAAG TCGGGGCCGG CTCGTTCAGG
GAGGAGGTTC TGCCCGTCGA TTCGGTAACG GAATACTTCG AACACTTTCG CGTGCTCGAG
CTCGACTTCA CCTTCTATTC CATGCTGCTC GACGACGATG GACGTCCGAC CCGGTCCTTT
CATGTCCTCT CCGAGTACAA CGCGTGCATG AAACCGCAGG ACCGGGTGTT CCTCAAGGTT
CCCCAGGCGA TCTGCGCTCA GAAGGTCCGC AGAGCCGCCG GGCTTGTCCC CAACGACGAT
TACCTCGATG CCGAAAAGTT CCGCACGCAG TTCCTCCAGC CGGCGCAAGA CCTGCTCGGC
GAAAAGATCA AAGGATTCGT GTTCGAGCAG GAGTACCAGC GCGCCGCCGG TAAAATCCCC
GCGCCCCGGC TGGCCGAAAA CCTGGATGCC TTTTTCTCGG CCGTCCCCCC GGACAACCGC
TACCATTTTG AATTGAGAAC GGAAGGATAT CTGGTGGAAC CGGTATTCGA AGTCTTCGAA
AAGCACGGCG TGGGGCAGGT GCTTTCTCAC TGGACCTGGC TGCCCACGCT GGAAAAGCAG
TTTGCCCGCG CGGGCCGTCG CTTCTTCAAC ACCGGCGCAC AGAGCCTCAT CCGGCTGATG
ACCCCCCTGG GAAAGCGCTA CGAAGACGCA TACGCCATGG CCCATCCTTT CGACAAAATA
GTGGAGGGCA TGCTGCAGCC GAGGATGATC GACGAAACGG CACGCCTGGC CATGACCGGG
ATCGCTCGGG GCATTCATAT GAATGTCATC GTCAACAACC GCTCCGGCGG GAATGCGCCC
ACTATCGCCC GCCAGATCGC CATGTCTTTC CTGGACCTGC TCCGGTCGGG CAAGAGCGGC
GCGCCGGCCT GA
 
Protein sequence
MTPGNDFDPA RYDFRGLHPD LCIGTASDRY AGWIGQIYSA EKYRGRISRR VNKVGAGSFR 
EEVLPVDSVT EYFEHFRVLE LDFTFYSMLL DDDGRPTRSF HVLSEYNACM KPQDRVFLKV
PQAICAQKVR RAAGLVPNDD YLDAEKFRTQ FLQPAQDLLG EKIKGFVFEQ EYQRAAGKIP
APRLAENLDA FFSAVPPDNR YHFELRTEGY LVEPVFEVFE KHGVGQVLSH WTWLPTLEKQ
FARAGRRFFN TGAQSLIRLM TPLGKRYEDA YAMAHPFDKI VEGMLQPRMI DETARLAMTG
IARGIHMNVI VNNRSGGNAP TIARQIAMSF LDLLRSGKSG APA