Gene Sfum_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3865 
Symbol 
ID4457790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4718128 
End bp4718838 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content60% 
IMG OID639704638 
Producthypothetical protein 
Protein accessionYP_847969 
Protein GI116751282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0127474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA TCAGTATTCC GCAACCGTTT GCGTTCGAGA TTCTCAGCGG TCTGAAGACG 
ATTGAGGTCA GGCCCCTGGA CACGCTCCAT CGCGGGGACC TCCTGGTCTG TTCGGCGGGA
AAGCCCGCGT TTTCCACCGA GGAGATGGAG GAGATGGAGG ACGAGTACGG CTGCACCTTC
CAGTACGGTC AGGCGCTTTG CGTCGTCAAC CTGGCGGATG TGCGGCCCGC GGCGAAGGGC
GACGAGGAGG AGGCGCTCCT GGATGAAATC GATCCCGAAG CCTATTCCTG GGTGCTGGAG
GATGTTCGTC CCGTTCTTCC GTTCCCCGTG AAAGGCAAAC AGGGACTGTT CGAGGTCGAC
GATCGCCTCA TCACGCCCTC GCCCTTCCGT TATGATGAAA CCGTGGTCGT GAAGGGGGGG
ACCCTCGCCC TGGAGTTCGG CATCGATTTT TCGGGATGGC ACGGAAGGGC CTCGGAAATT
CTTCTCACCG AGGACGGAGA ACAGCGCGTT CACGTGATGT GGGACAGCGT GTCGCTGAAA
AACATGCCGC TCACGGCCAT CGAGCAATGC GTCAAAGGCG GTTTCGACTG GACCGGGGTG
CTGCTGCGCC TGGACGAGAT CGAGCGCGCC GAACCCAGGG ATACCTGGGA TGACGTCCAG
GCTGCCATAG AAGCGATCGA AGAGGGAAAC CCCGCCTTGT TCGAGGAATG A
 
Protein sequence
MKAISIPQPF AFEILSGLKT IEVRPLDTLH RGDLLVCSAG KPAFSTEEME EMEDEYGCTF 
QYGQALCVVN LADVRPAAKG DEEEALLDEI DPEAYSWVLE DVRPVLPFPV KGKQGLFEVD
DRLITPSPFR YDETVVVKGG TLALEFGIDF SGWHGRASEI LLTEDGEQRV HVMWDSVSLK
NMPLTAIEQC VKGGFDWTGV LLRLDEIERA EPRDTWDDVQ AAIEAIEEGN PALFEE