| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3849 |
|---|
| Symbol | |
|---|
| ID | 4457809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4698513 |
|---|
| End bp | 4699580 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639704622 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_847953 |
|---|
| Protein GI | 116751266 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0248874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCTC ACGTTCCGCT CAACACGGGA GATCGTCTCT ACAAATACGA GCTGCAAGCG
CGGCTGGGTG GAGGCGGCTT CGGAGATGTT TGGTTGGCCC ACGATCACAG CATTTCCAGG
GATGTCGCCG TCAAGGTTCT GGCCACGAAC GTCACCATCG ATGAGCGGCT GCAGGAAGCT
CGCATAGGAA ATCATCTGGA TCATCAGAAC CTGGTGAAGA TGCATTACGC CGATGTCGTC
CAGCACAACG GCGTCGACAT CGTCATCATC GCGATGGACT ATCACGCCAA CGGCTCGATC
ATGAATGGAG TAAATGCCGG TAACTTCATG CCCATTCCGG ACGTGATTCG CTTCATGGTC
GATATCCTGC GCGGGCTGGA GTACCTCCAC GAGCTGAATC TATATCACAG CGATATCAAG
CCTCAGAACA TCCTGGTCGG GACCAGCAAC CAGGGAGTCC TCACGGATTA TGGCATTTCG
TGCCATTCAC CCGTCGGCTG CTCCGCGCCA CATCGGGGCT TCTACAAGCT CCATGCTGCA
CCTGAAGTTC TACAAAACGG GCATGTGAGC GTGCAAACCG ACATATACCA GGTCGGGATC
ACCGCTTTCC GGTTGCTCAA CGGTCTCGGG ATGGTCCGCG ACAAATTCAA CAGCCTCGGG
CAAACCGATT ATTACCAACT GGTTCAGCAG GGCAAGGTCG TCCAATCCGG GGATTATTTG
CCCTTCATCC CACGGAATTT GAAAAGTGTC GTCAACAAGG CCGTCCACGT CGACCCCGCG
AATCGCTATC AATCCGCCGT GGAAATGCGT CGTGCCCTGG AGCGGCTCGG TTATCCGGGA
TACTGGACCT GCGACCCCTC CGGTGGATTT GTGGGGCACA ACGCCAACTA CGAGTTTCGC
TTCGAGGAGC AGCCAAAGGG GGCCAAACTT TTCGACTTCA CGGCATTCAA GAAGAACAAG
GCGACCGGCC GGGAAACTCG TGTCGGTGAA TATTCGACGA AGAATGTCCA CCGAAAGCAG
TCTGACGAGG CGAAACGAAA TTTCATGCAA TGGGTGGTAA CAGGATGA
|
|---|
| Protein sequence | MPPHVPLNTG DRLYKYELQA RLGGGGFGDV WLAHDHSISR DVAVKVLATN VTIDERLQEA
RIGNHLDHQN LVKMHYADVV QHNGVDIVII AMDYHANGSI MNGVNAGNFM PIPDVIRFMV
DILRGLEYLH ELNLYHSDIK PQNILVGTSN QGVLTDYGIS CHSPVGCSAP HRGFYKLHAA
PEVLQNGHVS VQTDIYQVGI TAFRLLNGLG MVRDKFNSLG QTDYYQLVQQ GKVVQSGDYL
PFIPRNLKSV VNKAVHVDPA NRYQSAVEMR RALERLGYPG YWTCDPSGGF VGHNANYEFR
FEEQPKGAKL FDFTAFKKNK ATGRETRVGE YSTKNVHRKQ SDEAKRNFMQ WVVTG
|
|---|
| |