| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3774 |
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| Symbol | |
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| ID | 4457907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4618479 |
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| End bp | 4622183 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639704547 |
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| Product | membrane protein-like |
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| Protein accession | YP_847878 |
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| Protein GI | 116751191 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0394533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAC GGAAGAAAAT GACCCTGTGG GCGGGTGGCG GAGCCGCATT ACTGCTCCTA
ACGCTGGTGG CCGCCCCCTT CATCGCCTCG CGGGTGATCG GCCTGGAATC GGTCAGGGAA
AAGCTGCTCA CCGACGTCCG CGAGCAGACC GGCCTTCACA TCGAGTTCAG GAAACTCGAG
CTTTCCTTCC TGCCCACTCC CAGGCTCCTG ATTCATTCCG GAGGCCTGAC GCTCCCCGGA
AAACTGGACG GCACCGTTGA CACCCTCGTC CTGGTCCCCA GGCTCCTGCC GCTTTTCAAG
GGCGAGTTGA AGGCGGACAT CATTCGGCTG GAGTCTCCCA AGTTCTCCAT CACGCTTCCG
CAGCCGAGAG TGGAAGCGCA GCCCGAGCCC ACGAGCTTCA GCAGAAGGTC CGCCGAAAAG
GGGGTTCGAG CCCTCATTTC GCTGCTCAAA CCCGAGACCC ACGAAATCAC CATACGGATC
ACCAACGGCA GCTTCGAATG CCGGGATGCC GCGGGCAGTC GCTTCTGGTT CCGCGAAGTG
AACGCGCGCG CCGCCATGAC CTCCGAACGG CTTGAATTGA GCGCCGACTG CATGCGGTCC
AACCTCTGGG AAAGCCTCAT CGTCAGCGGC TGGATGAACC CCAGGGATCT GTCGAGCAGC
GGCCGGGTGA TTCTCCACGG TTTCTCGCCG GAACCGCTTT GGGCTTACCT TTTTCCCGGC
GCCGCGATGC GTTTCGGCGA ATCGAGGCTG GACCTGGACG CGACCCTGGT GAGCGAAGGT
CCACGGAACA TGCGGGCATT CTTTCAGGGT TCCGCGCCGA TCGTCACCCT CATCGAAACC
GACGACGACC AGCTTGCCCT CAAGGGCGGC GCCGTCCAAG GCTCCTTCGC GCTGGAAGGC
CGCAGACTCG AAATCGACCT GACGCGACTC GATTTTCTGT ACCCCCAGGC CAACCTTACC
GGCCATTTCT TGCGGGACCC CGCCTCATCC ACGGTCAGCC TGGAACTGGA AGGCCGGGAC
ATGGGGGCTT CGTCTGTGCG CGAAGTGGCC CTGGCTCTAC AGGGAGAACG TCGCGTCGTC
CAGAATATTT TCGAGATCAT CCAGGAAGGC CAGGTGCCTC GGATCACCTT CAGCACGCGG
GGCAAGCGCA TGGGAGATCT GCGGAAGCCC GAGAACATCG TGATCAAGGG CAACATCCAC
CACGGCAAGG TGTACATCCC GAAAATCAAG ATGACGGTGG AAGACGTCGT GGGCGATGTG
GTCATCACCA ACAACGTTCT CGAAGGAACC AGCCTCATCG GCCGCACGGG CAACTCCCGG
GGAAGGGACG GTTTCCTCAG GGTCGGCCTC ACCAAAGACA ACTCGACCTT TCACCTCGAC
ATCCTGATCG ACGCGGATCT CGCCGACCTG CCCCCGGTTC TCGACAATAC GGTGAAAAGC
GATGCTTTCC TGCAGGAACT GGCCATCATG AAGAACGTGG AGGGCAAAGC CACGGGGAAA
CTGATCCTGG GGGAGAGCCT GCGGGACGTC AACACGCGGG TGGAAGTCGG AGCGTTCGAG
CTGTCCGGAG ACTACGCGCG CATTCCCTAT CGCATCGATC TCAAAGGCGA ATCGCTCCTT
TTCGACGAGC GGATGATTTC GACGTCGGGC TTCAGCGGTT CATTCGGGAA GACCTCCTTT
TCCCGGATCA ACCTGCTCTA TCGCTGGGGG GAACAGCATT ACATGGAGAT CACCGCCCGG
CAACAGGGGG CGAAGATCAA CATTGACGAG GTCCACCCGT TGTTGAGGGG CGTTGAGAAG
AACCGCGGGA TTCAAAGACC CTTCGACGTC GTGAAAGGGA CCCTCTCCCT GGACGCCCTT
GATTTCAAGG GCCCCATCCT CTACCCCAAG GAGTGGATCT TCACCGGCAA GGGAAGCGTC
GACGACGCGG TCGTGCAGAT TCCGGTGTTT CCCGCGCCGT ACAACGTCAA GCGGGGCCGC
CTCGAAGGCG ACCAGGAAAC CCTCTTGCTC CAGGATTGCC AGACCCGGTT TCAGGACGCC
TCGGCTTCCG TTTCCGGAAG TCTCAAGGGA TACATGGAAA ACCTCAGCTC CATGGACTTG
ACTTTCCAGG GTAACGTGGG CGTCGACGCG AATCGGTCTT TCCACGACTT TATCGACCTT
CCGGCCACGT ACCGCAACGC CGCGCCCGTA GCCGTCTCCG ACGCTCACCT GGTGTGGGAA
AGGACGGGCA GGACACTCTT CGAAGCGAAC ATGGTTCCGA AAGGGGGGCC GCGTGTGTCC
ATGGAATTGG AAAGGATTCC GGGCCAAATC GACATCCGGA GGCTGAGCAT CAAGGACAAC
GATTCCGACG CGTTCCTGTC GCTCAAGATC AGGGAAAAAG GTTTCAAGCT GGGTTTCTAC
GGAGTCCTGA GCAACAAGAC CGCGGATCGT CTCCTGATCC GGAACGAGCT CCTCGGCGGC
TGGATACGGG GCAACTTCAA GACGTATATC CGCCTGAACA AGCCAATGAA TTCCACAGCC
TGGGGGCAAC TCGAAGCGGC GGGCTTCGTC TACTCGCACA AGCTCGGAAC ACCGGCCCGG
ATCGAAACCG CCAGGCTCAC GGCCAACGGC AACAAGCTGA AAGTGCGATC CGCCCGCGTG
AACTGGCTGG ACGCCAGGAT GAATGTCGTG GGAAGCGTCA AGTTCACTCC GAGCGGATTC
AAGCTCGACA TGGACCTGTC CGCCGACAGA GTCGACTTCG AGAAGCTTAA AGGGATCTGG
GACGACACCC GCAAGGCGCC CGTCCCTGCC TCGACTCCGA AAACGAGCGA AAAACGCAAA
GACCTCAAGC TCCGGGGAAC ACTCAGGACC GGGATCGACA ACTTCACTTT CGGGAGCCTC
AACTGGAGTC CGGTCCAGGG CACCGTGCGC TTTCTCGAGA ACGAGGTGCA CATCGACATC
ATGCGCGCCG ACCTGTGCGG CATTCCCACC CCCGGCACCG TGAACATCGC CGACGGGCGC
ATGCAGATCA ATCTCAAACC GGGGGGAAGC GGCCTCGACC TGGACTCGAC CCTGACCTGC
CTGTGGAACA GGAAGGGCCT CCTGAGCGGC ACTTTCGACC TCAAGGGGAA CGTCTCGGCC
GCGAATGTGA ACGACGACGC GCTCGGCCTG CTGTCCGGGA ACCTGGAGCT GCTGGCCCGC
AAGGGCCGCA TGTACCGTTT CGAAATCCTC GCGAAGATCT TCACTCTGAT CAATTTCACC
GAGATTTTCC GCGGCAGGCT TCCGGACCTG CTCACCGAAG GATGTTCCTA CGACACCATC
AAGGCCGCGG GAAAGCTCCA GGACGGCAAG CTGATCCTGG ACAACTCGGT GGTGGACGGC
TCGTGCGTGC GGATGGTCTG GAAAGGCGAG GTCGACCTGG TGAACAGGAA AGTGAACCTC
ATCGTCATTG TGGCGCCGTT CAGGACCGTG GACCGGATCA TCGACAAGGT TCCGGTGGTG
GGCAAGCTGA TGAACGGCAC CCTCATTTCC ATACCCGTGC GGGTCACCGG CGACCTGGCG
GACCCCACCG TGATCCCTCT GTCGCCCTCC GCGGTGGGTT CGGGTTTGCT CGGCTTCATG
AAGCGAACTT TCGAGCTTCC CTTTTCCCTG CTTGAGCCCT TTCGCAATCA AGAATCTCCC
GAAACCTCCC CCAGCGGCGC GCCGCCCGAC ACCGAAGTGA AGTGA
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| Protein sequence | MTRRKKMTLW AGGGAALLLL TLVAAPFIAS RVIGLESVRE KLLTDVREQT GLHIEFRKLE
LSFLPTPRLL IHSGGLTLPG KLDGTVDTLV LVPRLLPLFK GELKADIIRL ESPKFSITLP
QPRVEAQPEP TSFSRRSAEK GVRALISLLK PETHEITIRI TNGSFECRDA AGSRFWFREV
NARAAMTSER LELSADCMRS NLWESLIVSG WMNPRDLSSS GRVILHGFSP EPLWAYLFPG
AAMRFGESRL DLDATLVSEG PRNMRAFFQG SAPIVTLIET DDDQLALKGG AVQGSFALEG
RRLEIDLTRL DFLYPQANLT GHFLRDPASS TVSLELEGRD MGASSVREVA LALQGERRVV
QNIFEIIQEG QVPRITFSTR GKRMGDLRKP ENIVIKGNIH HGKVYIPKIK MTVEDVVGDV
VITNNVLEGT SLIGRTGNSR GRDGFLRVGL TKDNSTFHLD ILIDADLADL PPVLDNTVKS
DAFLQELAIM KNVEGKATGK LILGESLRDV NTRVEVGAFE LSGDYARIPY RIDLKGESLL
FDERMISTSG FSGSFGKTSF SRINLLYRWG EQHYMEITAR QQGAKINIDE VHPLLRGVEK
NRGIQRPFDV VKGTLSLDAL DFKGPILYPK EWIFTGKGSV DDAVVQIPVF PAPYNVKRGR
LEGDQETLLL QDCQTRFQDA SASVSGSLKG YMENLSSMDL TFQGNVGVDA NRSFHDFIDL
PATYRNAAPV AVSDAHLVWE RTGRTLFEAN MVPKGGPRVS MELERIPGQI DIRRLSIKDN
DSDAFLSLKI REKGFKLGFY GVLSNKTADR LLIRNELLGG WIRGNFKTYI RLNKPMNSTA
WGQLEAAGFV YSHKLGTPAR IETARLTANG NKLKVRSARV NWLDARMNVV GSVKFTPSGF
KLDMDLSADR VDFEKLKGIW DDTRKAPVPA STPKTSEKRK DLKLRGTLRT GIDNFTFGSL
NWSPVQGTVR FLENEVHIDI MRADLCGIPT PGTVNIADGR MQINLKPGGS GLDLDSTLTC
LWNRKGLLSG TFDLKGNVSA ANVNDDALGL LSGNLELLAR KGRMYRFEIL AKIFTLINFT
EIFRGRLPDL LTEGCSYDTI KAAGKLQDGK LILDNSVVDG SCVRMVWKGE VDLVNRKVNL
IVIVAPFRTV DRIIDKVPVV GKLMNGTLIS IPVRVTGDLA DPTVIPLSPS AVGSGLLGFM
KRTFELPFSL LEPFRNQESP ETSPSGAPPD TEVK
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