| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3721 |
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| Symbol | |
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| ID | 4457973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4536166 |
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| End bp | 4538052 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639704494 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_847826 |
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| Protein GI | 116751139 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.457399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAA GCTTTTCGGG ATTCCGCGCT GGATCGTCTA TTGGATCGCG GTCGCCTTTT
CCTGCTTCCA GATCTACACG GCGGCTTTCG GGTTGCTTCC CGCGCAGTTG CAGCGCTCCA
TTCACCTCTC CTTCACCTTC GCTCTCGTTT ACCTGCTGTT TCCAGCCCGA CTCTCCAGGA
CCAGCGATCG GCCGGCCTGG CACAATTTAT CTGTTGACCG CTTTCGCCGT CGCGGTCGGT
CTCTACATTA CCATCAACTA TACGCGTCTG ATGGAATCCG GCGGGGACTA TGAGACCATC
GACTTCATCG TCTCCTGGTT TGCCATCCTG CTCACCCTGG AAGCGGCACG GCGAGTGGTC
GGGCTTCCCA TCGTCATCAT CGCCTCGACC TTCCTCGCCT ATGCCTACTT CGGAGCCTAT
TTCCCCGGTT TTCTGAATCA TCGCGGATAT TCTCTTGAAC GGATCGCATC CCACATGTAC
CTGACCACGG AAGGCATCAT GGGGATTCCC CTGGGAGTTT CCGCCACATT CATCTTTCTG
TTCATCCTGT TCGGTTCGTT CATGGAAAAG TCTGGCCTGG GACAGCTTTT CGTCGACGTT
TCCAACGCCT TGGCCGGCTG GGCTTCCGGA GGGCCCGCCA AGGTCGCCGT GGTCTGCAGC
GCGCTGGAAG GCATGGTTTC AGGGAGCTCG GTGGCCAACA CCGTGGAATC GGGGAGTCTC
ACCATCCCCA TGATGAAGCG GCTCGGGTAC CGGCCCGAAT TCGCCGCGGC GGTGGAAGCG
TCCGCCTCCA CCGGCGGCCA GATCATGCCG CCCGTGATGG GAGCCGCGGC GTTCATCATG
GCCGAGTTCC TCAACATCCC CTACCTCGAA ATCGCCAAGG CGGCGGCCAT CCCCGCGTGC
CTTTACTTTG CCGGGATTTT CATCGAGGTG CACTTCGAGG CCAAGCGATG CAAGCTGCGC
GGCATGAGCA GGGACGAGCT CCCGCGGTTC TCCCGCGTCA TGGCGGAACG CGGCCACCTC
TTCATGCCGC TGGTGGCCAT CATCGGTTTT CTCGTTGTGG GATACACTCC CCTCTATGCC
GCCCTGATGG GCCTCGCCAT GTGTATCCTG GCGTCATTTT TGAGGAAATC GACCAGGATG
AGTCTCCGCG AAATCGTGGA CAGCCTGGAA ACGGGAGCCC GTAATGCCAT AGGAGTCGCC
ACCGCCTGCG CCACCGCGGG CATCATCATC GGGGTGGTAA CTCTTACCGG CCTGGGCCTC
AAGATGGCCA CCGGCCTCAT CGAACTGGCC GGCGGCTACC TGCTGCCGAC CCTTTTCTTC
ACGATGATCG CTTCCCTTAT CCTGGGCATG GGAGCGCCCA CGACCGCCAA CTACATCATC
ACCTCAACCA TAGCCGCTCC ATCCCTCATC ATGCTCAACG TTCCGCCCCT GGCGGCCCAC
ATGTTCGTCT TCTATTTCGG AATCGTCGCC GACATCACCC CGCCCGTGGC TTTGGCCGCA
TATGCGGGAT CGGGCATCGC AAGATCGGAT CCGATGAAGA CCGGGTTCAC CGCGACCAAG
CTCGCCATCG GTGCGTTCCT CGTGCCTTAT ATTTTCGTCT ACAACCCCGC CATGCTCCTC
ATCGGAACCA CACCCCTGGG CCTGGCTCAA AACCTGGTCA CCGCCTCCCT CGGCATGTTC
GGAGCGGGAG TGTCCATGAT CGGCTTCTGT CTTGCGCCCA TGACCTGGTA CGAAAGGGTT
TGGTTCTTCG CGGGAGGCCT TCTGATGATC GATCCGGGAA CCCTCACCGA TTTGGTTGGT
TTGGGCATAC TGGCGGCGGG AGTCTTCATC CAGTGGCGCA AGAGGAAATC GCTCTCCCTC
GAAGCGGACT TGAGCCCGAA CGCCTGA
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| Protein sequence | MRVSFSGFRA GSSIGSRSPF PASRSTRRLS GCFPRSCSAP FTSPSPSLSF TCCFQPDSPG
PAIGRPGTIY LLTAFAVAVG LYITINYTRL MESGGDYETI DFIVSWFAIL LTLEAARRVV
GLPIVIIAST FLAYAYFGAY FPGFLNHRGY SLERIASHMY LTTEGIMGIP LGVSATFIFL
FILFGSFMEK SGLGQLFVDV SNALAGWASG GPAKVAVVCS ALEGMVSGSS VANTVESGSL
TIPMMKRLGY RPEFAAAVEA SASTGGQIMP PVMGAAAFIM AEFLNIPYLE IAKAAAIPAC
LYFAGIFIEV HFEAKRCKLR GMSRDELPRF SRVMAERGHL FMPLVAIIGF LVVGYTPLYA
ALMGLAMCIL ASFLRKSTRM SLREIVDSLE TGARNAIGVA TACATAGIII GVVTLTGLGL
KMATGLIELA GGYLLPTLFF TMIASLILGM GAPTTANYII TSTIAAPSLI MLNVPPLAAH
MFVFYFGIVA DITPPVALAA YAGSGIARSD PMKTGFTATK LAIGAFLVPY IFVYNPAMLL
IGTTPLGLAQ NLVTASLGMF GAGVSMIGFC LAPMTWYERV WFFAGGLLMI DPGTLTDLVG
LGILAAGVFI QWRKRKSLSL EADLSPNA
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