Gene Sfum_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3714 
Symbol 
ID4457966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4530033 
End bp4531148 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID639704487 
Productbeta-ketoacyl synthase 
Protein accessionYP_847819 
Protein GI116751132 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0233521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCCA CCGGGTTCGA AGGGGATGTG TGGGCTTTCC CCCTCGAACG TGAATTTGAC 
GTCAGGAGAT TCACGGGGCG CTGCAGGAAC GCGAGGTATC TCAACCGCGG CGCCCGGTTT
TGCGTGGCGT CGGCCATGGC CGCCGTGAAG GGGGCGGAAC CGGCGGGACA CATGTGGGAG
AGGGCCGGGC TCTTCGTCGG CGCCGGCCCC AACCTGGACA TCGGAAACGA GTTCCCGGAA
ATCAGGAGCG GCGCGATCGA TAGCAAGTCT CTGTCCGCGC TCTGGATTCT GAAGTTTCTT
CCCAACACCG CCGCTTCCGT GATCGCCGAC CTCGCGGGCA TCCACGGCGA GAATGCCACC
ATCGGGACGG CGTGCGCGGC CTCTCTTCAG GCCATCGGCG AAGCTTTCCG CAAGATCCGG
CACGGGGACC TGGACGTGGC GCTGGCCGGA GGCGGAGATT CGCGGCTGAG CCCCGGAGGG
ATCCTCGCAT ACCGCAAAGC CCAGGCGCTC CAGACCGAAG AACCGGGCCG CGGTCAAGAA
TACAGCCCGT TCAGCGCCGC CCGGGCGGGC TTTGTGCCCG GCGAGGGAGG GGCTTTCGTG
GTGCTGGAAA ACCTGGAACA CGCCCGAAGC CGGGGCACCC GGATCATCGC CGAAATTTGC
GGTTACGGCG CATCCATGGA CGGGTACAAC ATGACGGCTC CCGACCCGTC GGGACGGTGG
GCGGAAGCCG CCGTGCGCTC GGCACTGAAC GAATCCGGCA TGGCGCCTGC CCGGGTCGAC
GTCGTCTGCG CCCACGGTAC CGGAACCGTC CTCAACGACG CCATGGAAGC CGACCTCATC
GCCCGCGTGT TCGGCGAGCA CCGCCCCATG GTCACTGCCT TGAAATCCCG CATCGGGCAT
CTCGCGGCGG CGTGCGGGGC CGTGGAGCTG TCCATCGGGC TCGCCTGCAT GGAACACGGG
TACGTGCCGG AGATCCGGCA CCTCGAAGAG CCCTGCCGCG CCGGCATCGA CTTCGTCCTG
GCGCCCCGGA GCGCGCAGGT CTCCACGATG CTGATCCAAA ACTTCGGATT CGGCGGTCAG
AACAGCGCCC TGGTGGTGAA CAAATGGGAA AACTAG
 
Protein sequence
MVPTGFEGDV WAFPLEREFD VRRFTGRCRN ARYLNRGARF CVASAMAAVK GAEPAGHMWE 
RAGLFVGAGP NLDIGNEFPE IRSGAIDSKS LSALWILKFL PNTAASVIAD LAGIHGENAT
IGTACAASLQ AIGEAFRKIR HGDLDVALAG GGDSRLSPGG ILAYRKAQAL QTEEPGRGQE
YSPFSAARAG FVPGEGGAFV VLENLEHARS RGTRIIAEIC GYGASMDGYN MTAPDPSGRW
AEAAVRSALN ESGMAPARVD VVCAHGTGTV LNDAMEADLI ARVFGEHRPM VTALKSRIGH
LAAACGAVEL SIGLACMEHG YVPEIRHLEE PCRAGIDFVL APRSAQVSTM LIQNFGFGGQ
NSALVVNKWE N