| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3638 |
|---|
| Symbol | |
|---|
| ID | 4458061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4446237 |
|---|
| End bp | 4447154 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639704410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847743 |
|---|
| Protein GI | 116751056 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.603625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.524046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA CCGTCTTCGT CAGGCCTCCT GCGCCGCACA TCCTGTGGAC GCTCCTGCTG
GTCGGAATCC TCGCGATATC CTGCGCCTCC ATTTTCATCC GGCTTGCCGA AGCCCCTCCC
CTGGCGATAG CCGCATACCG GGTCGGCATC GCCGCGCTGA TCATCGCGCC GTACACTCTA
TACAAACGGC CCCGGGCCGA CGATCGTTGG AATTCCCGGA GGCTGTTGCA GGCCATTCTG
GCCGGCGTCT TCCTGGCCCT GCACTTCGCC TTCTGGATCA AGTCCCTTCA GATGACGTCG
GTGGCGAGCG CGGCCACGCT GTGCAACACC ACGCCCCTGT TCACGGCCCT CTACGCCCGG
CTGTTTCTCG GGGAACGGCT TCCGGCCCGG GCGACGGCCG GCATCCTGGT GGCCGTGGGC
GGCGGCGTGC TCCTTGCGGG AACGGATTTC CTTCTCACCG CGGAGGCGCT CCAGGGAGAC
CTGCTGGCAG TGTGCGGAGC GATGGCGGCA ACGGGATATC TCCTCGCCGG CAGCGCGCTC
AGGCCGTGGC TCAGCTTGCC CGCCTACACC CTGGCCGTCT ACGGAATCGC CGCGCTGGTC
CTGCTCGCCT GGAGCGTCGC CTCGGGAACG ACGCTGAGCG GCTTCCCCGC GCAGACATAT
CTTTATCTCG TCCTGCTGGC CGTCATCCCC CAGCTGATCG GCCACACGAC TTTCAACTGG
GCCCTGCGCT TTCTGTCGCC CACTTCCGTC GCCATCCTCG TCCTCGGTGA ACCGGCGGGC
GCGACCCTGC TCGCCTGGCT CTTCCTTGGC GAATCACCGA CCCTGCTCAA ATCCGCCGGC
CTGATGACAC TCGGCGCGGG CATTGTCCTG AGCTCGCTTT CAATGCCCTC AAGGGAAAAT
GCCGATCCGG CCGCCTGA
|
|---|
| Protein sequence | MKETVFVRPP APHILWTLLL VGILAISCAS IFIRLAEAPP LAIAAYRVGI AALIIAPYTL
YKRPRADDRW NSRRLLQAIL AGVFLALHFA FWIKSLQMTS VASAATLCNT TPLFTALYAR
LFLGERLPAR ATAGILVAVG GGVLLAGTDF LLTAEALQGD LLAVCGAMAA TGYLLAGSAL
RPWLSLPAYT LAVYGIAALV LLAWSVASGT TLSGFPAQTY LYLVLLAVIP QLIGHTTFNW
ALRFLSPTSV AILVLGEPAG ATLLAWLFLG ESPTLLKSAG LMTLGAGIVL SSLSMPSREN
ADPAA
|
|---|
| |