| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3490 |
|---|
| Symbol | |
|---|
| ID | 4458192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4263196 |
|---|
| End bp | 4264107 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639704262 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_847596 |
|---|
| Protein GI | 116750909 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.411512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAA AGACCTCGCT TCGCGCCCTT CGGGAAAGCG CTTCCCTGTA CCTTGAGAAT
GTCCGCAAGT GCTACGGCCC CAAGGTCATT CTCAAGGACA TAGACCTCGC CGTGAAGAAG
GGCGAATTCT GCAGCCTCGT CGGACCGAGC GGGTGCGGAA AATCGACGCT GCTCCGGCTG
ATCCTCGGAC AGGAGTACGT GACCTCGGGG ACTTTCCTCA TCGGCGGCAA ACCGGTGGGC
CCCCCCGATA CGACCCGGGG CATCGTCTAC CAGCGCTATT CGCTTTTTCC CCATCTCACC
GTGCTCCAGA ACGTGGTGCT CGGATTGAAC CTGTCGAGCG GTCTCATCGA CAGGTTTCGC
ATGAAGAAGC AATTCCACGA TGAGGCCATG CGGTTCCTGG AAGAGGTCGA GCTTGCCGAC
CATTCCCACA AATACCCCCA CGAACTGTCG GGCGGCATGC AGCAGCGGGT GGCGATTTCC
CAGGCACTCA TCATGAAGCC CGAGCTCCTC CTGATGGACG AGCCGTTTGG AGCGCTCGAC
CCCGGGACCA GGGAGCATAT GCAGATCTTT TTGCTGGGGA TGTGGGAAAA GTATAAGATG
ACGGTGTTCT TCGTCACGCA CGACCTGGAA GAGGCCGTGT TTCTCGGAAC GCGCATCCTC
GTGCTCTCGC AGTACTGGTC GGACGGCAAA ACGGACGTTG ACGGTCCCGG TCACGGGGCC
CGCATCGTCT CCGACTACCC GCTCGCTCGC CGGGCGACTT CGACGGCCGT CAAGAAGTCC
GCCGATTTCG GGGAACTCAT TCAGAAAATA CGTCATGACG GGTTTGATCC CGAATACCTG
CAGCACGTCA CGGAATTCGA TCTGCGGCAT CCGGATTCCT TCCGGACGTT GGACGAGAGC
GAGGCGGGAT AG
|
|---|
| Protein sequence | MEEKTSLRAL RESASLYLEN VRKCYGPKVI LKDIDLAVKK GEFCSLVGPS GCGKSTLLRL
ILGQEYVTSG TFLIGGKPVG PPDTTRGIVY QRYSLFPHLT VLQNVVLGLN LSSGLIDRFR
MKKQFHDEAM RFLEEVELAD HSHKYPHELS GGMQQRVAIS QALIMKPELL LMDEPFGALD
PGTREHMQIF LLGMWEKYKM TVFFVTHDLE EAVFLGTRIL VLSQYWSDGK TDVDGPGHGA
RIVSDYPLAR RATSTAVKKS ADFGELIQKI RHDGFDPEYL QHVTEFDLRH PDSFRTLDES
EAG
|
|---|
| |