Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3456 |
Symbol | |
ID | 4458228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4223500 |
End bp | 4223964 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704228 |
Product | hypothetical protein |
Protein accession | YP_847562 |
Protein GI | 116750875 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00072555 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTTCTC TTCCCGGGAA ACTCCTGGTG GTGTTCCTGG TCGTGGCCGC GCCTCTGTTT TTCAGGCAGG CCATCGGGGC GCAGAAAGAC AGTTCGGCGA CGCCCCAGAA TGCAGCGCCG CCCGTGGAGC AACCATCTCA GAAGCTGACC CTGAGTCAGG CGGTCATGTG CGAGAGGGTC GAAAACCTTG TCCCAAGCAA ATCCGCCGTT GTGTTCTCCG TCATTGCGGG GCAGGTTTGC TGCTTCACCG CATTCGACCC GGTGCCCCAG CCCACGCTGG TGTACCACCG CTGGTACCGC CGCGACGAGC TCAGCACCCA GACCAGGCTC CGGGTGTATC CGCCGAAGTG GTCCACCTAC AGCGTGATAC AGCTCCGGGA AACCGACAAA GGCCCGTGGC GCGTGGAAGT CGTCGACCAG AACGGTCATG TCTTCGAAAC GCTGCGTTTC AGCATCACTG ACTGA
|
Protein sequence | MASLPGKLLV VFLVVAAPLF FRQAIGAQKD SSATPQNAAP PVEQPSQKLT LSQAVMCERV ENLVPSKSAV VFSVIAGQVC CFTAFDPVPQ PTLVYHRWYR RDELSTQTRL RVYPPKWSTY SVIQLRETDK GPWRVEVVDQ NGHVFETLRF SITD
|
| |