Gene Sfum_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3456 
Symbol 
ID4458228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4223500 
End bp4223964 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID639704228 
Producthypothetical protein 
Protein accessionYP_847562 
Protein GI116750875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00072555 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTCTC TTCCCGGGAA ACTCCTGGTG GTGTTCCTGG TCGTGGCCGC GCCTCTGTTT 
TTCAGGCAGG CCATCGGGGC GCAGAAAGAC AGTTCGGCGA CGCCCCAGAA TGCAGCGCCG
CCCGTGGAGC AACCATCTCA GAAGCTGACC CTGAGTCAGG CGGTCATGTG CGAGAGGGTC
GAAAACCTTG TCCCAAGCAA ATCCGCCGTT GTGTTCTCCG TCATTGCGGG GCAGGTTTGC
TGCTTCACCG CATTCGACCC GGTGCCCCAG CCCACGCTGG TGTACCACCG CTGGTACCGC
CGCGACGAGC TCAGCACCCA GACCAGGCTC CGGGTGTATC CGCCGAAGTG GTCCACCTAC
AGCGTGATAC AGCTCCGGGA AACCGACAAA GGCCCGTGGC GCGTGGAAGT CGTCGACCAG
AACGGTCATG TCTTCGAAAC GCTGCGTTTC AGCATCACTG ACTGA
 
Protein sequence
MASLPGKLLV VFLVVAAPLF FRQAIGAQKD SSATPQNAAP PVEQPSQKLT LSQAVMCERV 
ENLVPSKSAV VFSVIAGQVC CFTAFDPVPQ PTLVYHRWYR RDELSTQTRL RVYPPKWSTY
SVIQLRETDK GPWRVEVVDQ NGHVFETLRF SITD