Gene Sfum_3433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3433 
Symbol 
ID4458269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4193918 
End bp4194559 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID639704203 
Producthypothetical protein 
Protein accessionYP_847539 
Protein GI116750852 
COG category[S] Function unknown 
COG ID[COG3647] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000132971 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAACA CGAAGAAAGC ACTGCTGTCG GTTTTCTGCA TCGTTTTGCT CTGGTCCGGC 
ATTGCGCCGC ACGATTATTT CACGTGGTTT CTTGAGGTTC TGCCGGCGCT TCTGGCGCTC
CTGGCCCTTG CCGTCACCTG GAACCGGTTC AGATTCAGCA ACTTCATATA CGTCGTCGTC
TGCATCCATG CGGTCATTCT CATGATCGGG GGCCATTACA CCTATGCCGA AGTCCCGGTG
GGGTACTGGA TTAAGGACCT CTTCGACTTC GAGCGCAATC ACTTCGATCG CCTTGGACAT
TTCGCCCAGG GATTCACTCC CGCGCTGATC ATGCGGGAAG TCGCGATCAA GCGGGAAATC
ATCCGAGGCC GCGGCTGGCG GTTCTTTTTC ATCGCGTCCG CGGTGCTCGG GCTCAGCGCC
TTCTATGAGT TCTTCGAATG GTGGACGGCG CTCGCCACCG GCGAAGCCGC CGCCGCTTTT
CTCGGCACGC AGGGCGATGT CTGGGACACG CAATGGGACA TGTTCATGTG CACGTTGGGG
GCCCTGACCG CGCTCGCCCT GTTCCGGGGG CTGCATGACA GGTATTTGAA TGCCCGGCCC
GAAATCGCCG GTTCGAACGT CACGCGCGGG CGGGCGGTCT GA
 
Protein sequence
MDNTKKALLS VFCIVLLWSG IAPHDYFTWF LEVLPALLAL LALAVTWNRF RFSNFIYVVV 
CIHAVILMIG GHYTYAEVPV GYWIKDLFDF ERNHFDRLGH FAQGFTPALI MREVAIKREI
IRGRGWRFFF IASAVLGLSA FYEFFEWWTA LATGEAAAAF LGTQGDVWDT QWDMFMCTLG
ALTALALFRG LHDRYLNARP EIAGSNVTRG RAV