Gene Sfum_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3416 
Symbol 
ID4458287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4181941 
End bp4182747 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID639704188 
Productalpha/beta hydrolase fold 
Protein accessionYP_847524 
Protein GI116750837 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGAT ACGGCGTGGA CAATCTCAGA ACGCACGGTA CGGGTCCGTT TTGCGTGGCC 
GTCGTCCACG GTGGCCCCGG AGCAGCCGGG CAGGCGGCTC CGGTGGCACG GAGGCTGTCG
CGCGGCCGCG GCGTTCTCGA ACCGCTCCAG ACCGCCGCTT CGCTCCGGGG GCAGATCGAA
GAGCTGGAAA CGGTCCTGCG ACGGCACGGG ACACTCCCCG TGATCCTCAT CGGCTTCTCG
TGGGGGGCGT GGCTCAGTTT CATGGTGGCG GCCCTGTACC CGCCCGTGGT GAAAAAGCTG
GTGCTCGTTT CCAGCCCGCC TTTCGAAGCC GGGTATGCCC GCGGAATTCA GGAAACCAGG
CTGAGGCGTC TCGAGGAAGG GGAACGATCG GAGCTCGAAT CCCTCATCCG GCAATTGGAC
GATCCCGCCA TGGAGAACAA GACTGCCGCC TTCGCGCGTT TCGGGGCCTT GTTTTCCAAG
GCCGACGCCT ACGATTCGGA CGATGAGGAT CCCGCTGCAA TCGACTACCG GCCCGATATC
TTTGAGAGTG TGTGGCGCGA TGCCGCGGGC CTGAGACGAA GCGGCCGGCT CCTGGAGCTC
GGAAAACGGA TTCGCTGCCC GGTTGTGGCG ATCCACGGCG ACTACGACGC CCACCCGGCG
GAAGGGGTCC GCACGCCGCT GACGGACGTC CTCGAGGATT TTCGGTTCAT CCTGCTGGAG
CGTTGCGGAC ACGTGCCCTG GACCGAGCGG CATGCAAGGG ACGCGTTCTA TCGACGGCTC
GAGGAAATAC TGGCCTGCGG TATTTGA
 
Protein sequence
MQGYGVDNLR THGTGPFCVA VVHGGPGAAG QAAPVARRLS RGRGVLEPLQ TAASLRGQIE 
ELETVLRRHG TLPVILIGFS WGAWLSFMVA ALYPPVVKKL VLVSSPPFEA GYARGIQETR
LRRLEEGERS ELESLIRQLD DPAMENKTAA FARFGALFSK ADAYDSDDED PAAIDYRPDI
FESVWRDAAG LRRSGRLLEL GKRIRCPVVA IHGDYDAHPA EGVRTPLTDV LEDFRFILLE
RCGHVPWTER HARDAFYRRL EEILACGI