| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3415 |
|---|
| Symbol | |
|---|
| ID | 4458286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4180512 |
|---|
| End bp | 4181504 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639704187 |
|---|
| Product | nucleoside recognition domain-containing protein |
|---|
| Protein accession | YP_847523 |
|---|
| Protein GI | 116750836 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0127474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCTCCA TAGACTCCAT CAAGAAGCTG GTGTGGGAAG CCACGGACAT CACCCTGAGC
CTCTTCAGGA TCATGGTCCC CATCCTGATT GCCGTCAAGA TTCTCAAAGA GCTGGGCATG
ATCGAGATTC TCGCCGGCTG GCTGGCTCCC GTCATGCAAA TGGTCGGGCT TCCCGGGAGC
ATGGGGCTGG CGTGGGCATC GGCCATGTTG AACACGTTCT ATGCCGGGCT GATCGTGTTC
GCCTCCCTGA GCGCCGATAA TCCGCTGACC GTCGCTCAGA CGACGGTGCT CTACTCCATC
ATGCTGGTCG CCCACGGCCT TCCGATGGAA TTGGCCATTG CCCGAAAAGC GGGCGCGCGC
CCCGTCGCGA TGGGTTTGTT TCGCGTCGGC TGCGGCTTCC TGTTCGGCCT GTGCCTCCAC
CACCTCTACC AATGGGGAGG CTGGCTCCAG CAACCCAACG TCCTCGCCTG GGTCCCCCCC
TCCCAAGAGC CGTCTCTCGT CTCCTGGGCC GTCAACCAGG CCAAAACCCT GGCCATGATA
TACGTCATCA TTCTTGCCCT GGTCATTCTG CTGAGAATCC TGGCTCACCT CGGGATTACC
GGCATCATCA CCCGCCTGCT GCAGCCCGTG CTCACCGTGC TCGGCATCGG CAGCTCCGCG
GCCACCATCA CGATTGTGGG CATGACACTG GGGCTGGCAT ATGGAGGAGG TTTAATTATC
CGGGAAGCAA ACTCCGACCG AATAGACAAA AGGGATATTT TCTCGGCCCT GGCCCTGATG
GGATTGTGTC ACAGCCTCAT CGAAGACACC CTGCTCACGG TCATTCTGGG TGGCGACATG
TCGGGCGTAT TCTGGGGAAG AATCGTGTTT TCAATGGCTT GCGTCTTTCT TCTGGTCCGT
GTAATATCTC GAATCTCCGA CGCCGGCTTT TACCGCTATT TTTTCATGCC TGGAGCCGCC
GCCACCGAGT CCGAACAAGG AATGCCGCAT TGA
|
|---|
| Protein sequence | MISIDSIKKL VWEATDITLS LFRIMVPILI AVKILKELGM IEILAGWLAP VMQMVGLPGS
MGLAWASAML NTFYAGLIVF ASLSADNPLT VAQTTVLYSI MLVAHGLPME LAIARKAGAR
PVAMGLFRVG CGFLFGLCLH HLYQWGGWLQ QPNVLAWVPP SQEPSLVSWA VNQAKTLAMI
YVIILALVIL LRILAHLGIT GIITRLLQPV LTVLGIGSSA ATITIVGMTL GLAYGGGLII
REANSDRIDK RDIFSALALM GLCHSLIEDT LLTVILGGDM SGVFWGRIVF SMACVFLLVR
VISRISDAGF YRYFFMPGAA ATESEQGMPH
|
|---|
| |