Gene Sfum_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3307 
Symbol 
ID4458370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4048753 
End bp4049292 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID639704079 
Productrhodanese domain-containing protein 
Protein accessionYP_847415 
Protein GI116750728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.350362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTG GGAAAGCGCT TGGCGTATGG ATGTTGGGCC TTGCCTTGTT ACTGTGCCTG 
TCTTCCGGCG TGTTCGCGCT CGGCGGGCGA ACCGATGAAG CGGAAGTGCA GAAGCTTGCA
GCGAAATTTC ACAACGAAGC CGCCGGAGGG GGATACAGAA TCGTCAGCAC CGGCGAATTC
AAGGCCTGGC TGGATCAACT CGATCCCCGA TGGGCGTCGG ATATGAGGAC CCTGTTGATC
GTCGATACCA TGCCGCTTGA CGACGGCTTC AGGAAGCACC ACATTCCGGG CGCGGTGCCG
TTTGAGTTTC CGAACGACGA AGTAAACCGG TTGGACGACA AAACGAAGGC GAAGTTCGAA
GAACTCCTTG GGCCGGACAA GAACCGGAAG GTGGTTTTCT ACGGACGGGA CACGCAGTGC
GGCCGCAGTC ACAACGGGGC GATGTGGGCG GCCAGGCTCG GTTACACCAG GGTGTATCGT
TATCCCGACG GGATCAAGGG ATGGCTGGAA GCCGGGTACA TGGTCGACAG AACGGACTGA
 
Protein sequence
MKSGKALGVW MLGLALLLCL SSGVFALGGR TDEAEVQKLA AKFHNEAAGG GYRIVSTGEF 
KAWLDQLDPR WASDMRTLLI VDTMPLDDGF RKHHIPGAVP FEFPNDEVNR LDDKTKAKFE
ELLGPDKNRK VVFYGRDTQC GRSHNGAMWA ARLGYTRVYR YPDGIKGWLE AGYMVDRTD