Gene Sfum_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3288 
Symbol 
ID4458386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4027317 
End bp4027727 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content58% 
IMG OID639704060 
Productresponse regulator receiver protein 
Protein accessionYP_847396 
Protein GI116750709 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTT TCGGCGGGCT CCGAGCCGGA TTCCAAGGAG TGGTGATGGC GTTGGTGCTG 
GTGTTGGATG ATGAGCGGGA TGCCTGTCAG TTGATGGCCC GGATCATTTC CTCCTTCGGC
CATGAGGTGA AAGCGTTCAC GGACAGCGAG GAAGCGCTGA AATGGGTCAC CCGGGTGGAA
CCCGATCTGG CGCTCCTGGA TGTAGGACTG CGCGGCTCTT ACGGGATCGA CGTCGTGGAC
CGGTTTTTGC GCATCCGGCC GAAGCTTAAA GCCATTCTGA TCACGGGTTA TCCGTCCATG
GCGACTGCCG GAGAAGCCTT TCATTCCGGC ACACTGGACC TCCTGGTGAA GCCGGTGGAA
CTCGATGAGC TTGAAGCGCG TGTCCGCCTT GCATTGGGAT TGATAAAATA A
 
Protein sequence
MRSFGGLRAG FQGVVMALVL VLDDERDACQ LMARIISSFG HEVKAFTDSE EALKWVTRVE 
PDLALLDVGL RGSYGIDVVD RFLRIRPKLK AILITGYPSM ATAGEAFHSG TLDLLVKPVE
LDELEARVRL ALGLIK