Gene Sfum_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3260 
Symbol 
ID4458428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3993119 
End bp3994267 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content61% 
IMG OID639704032 
Productaminoglycoside phosphotransferase 
Protein accessionYP_847368 
Protein GI116750681 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGGCC GGGAAGACAC GCAATACGAC CCTCCCCGCA AGGGTGACGC CCGGGAGACG 
CTTCTGCCCG TAGCGGAGTG TTTCGAACCC CGGGGAACGA TTGTGGACAT ACGGCCGTTT
GGAAGCGGCA ACGTCCACGA CACGTACCTG GTGAGCCTCC AAGACGGTGA GGCTCCCCGA
TTTATCCTGC AGCGCGTGAA CACGAAAGTC TTTCATCGAC CGGAAATGGT GATGCGAAAC
ATGCGCATCG CCACGGAACA CATCCGGCTC AGGCTCCTTG ACGTTCAGCC CGGGACGGAT
CGTCGCTGGG AAGTGATGCG CGTTCTCGCC GCGCGTGACG GGCGCGACCA CTTTATCGAT
TCCGACGGGT CGTTCTGGCG TGCCCTCAGT TTCATCGAAG GCGCCCGGAC GTTCGACATT
GTCGAGGACA CGGATCACGC CCGGGAAGTC GGCTACGCGC TGGGCCGTTT CCAGCGGCTC
GTCAGCGACC TGCCTCCGGA GCTGCTGGCC GACACTCTGG AAGGTTTCCA CATCTTGCCG
CTCTACCTGC GTCACTACGA TCGGGTCCTG ACCGAAATCT CTCCGGGAGC ATCTCCCGAA
ATGAAACACT GCCTGAGATT CGTGAATGAA CGCCGGAGCC GGGTGAATGT GCTCGAAGAC
GCCCGCGCTT GCGGCCGGCT CGTTCATCGT ACGATTCACG GCGACCCGAA AGTCAACAAC
GTCATGCTGG ACGCCGTCAG CCGGCGCGCC GTCAGCATGG TGGATCTGGA CACCGTCAAG
CCGGGCCTGG TGCATTACGA TATCGGCGAC TGCCTGCGCT CGTGCTGCAA CCCGCTCGGA
GAGGAAACGG CGAACTGGGA ATCGGTGCGC TTCGAACCCG AGTTCTGCCG CGCGATTCTG
GAAGGCTACC TGCCGCAGGC CAAGGTTTTT CTCACGCAAG GCGACCGGGA CCACATCTAC
GACGCCGTTT CGTTGATCGC CTTCGAGCTG GGACTGAGAT TCTTCACGGA CTACCTGGAG
GGCGACGTCT ACTTCAAGGT CGCGCACCGG AAACACAACC TCGCGCGGGC GCTCGTCCAG
TTTCGGCTCA CCGCGAGCAT TGAGTCCCAG GAATCGACTA TCCGTGAGAT TATCGAAGAC
TTGACATGA
 
Protein sequence
MTGREDTQYD PPRKGDARET LLPVAECFEP RGTIVDIRPF GSGNVHDTYL VSLQDGEAPR 
FILQRVNTKV FHRPEMVMRN MRIATEHIRL RLLDVQPGTD RRWEVMRVLA ARDGRDHFID
SDGSFWRALS FIEGARTFDI VEDTDHAREV GYALGRFQRL VSDLPPELLA DTLEGFHILP
LYLRHYDRVL TEISPGASPE MKHCLRFVNE RRSRVNVLED ARACGRLVHR TIHGDPKVNN
VMLDAVSRRA VSMVDLDTVK PGLVHYDIGD CLRSCCNPLG EETANWESVR FEPEFCRAIL
EGYLPQAKVF LTQGDRDHIY DAVSLIAFEL GLRFFTDYLE GDVYFKVAHR KHNLARALVQ
FRLTASIESQ ESTIREIIED LT