| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3129 |
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| Symbol | |
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| ID | 4458539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3842639 |
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| End bp | 3844045 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639703900 |
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| Product | DNA photolyase, FAD-binding |
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| Protein accession | YP_847237 |
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| Protein GI | 116750550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | [TIGR00591] photolyase PhrII |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACGAT CGGACGTTGA GGCGGAGAGG ATCACGTTCC TCAACCGGCA GAAGCGCTCC
AAAGGCGCTT ACGTCCTTTA TTGGATGCAG CAATCCCAGC GGAGCGAGTT CAACCACGCC
CTGGAATACG CGGCTCACCG GGCGAATTCG CTCCGGCAAC CGCTGGTGGT CGTATTCGGC
CTCACCGGCG ATTACCCCGA AGCCAACCTT CGGCATTATA CGTTCATGCT TGAAGGGCTC
GAGGAAACCG GGGCGTCCCT GCAGGCGCGC GGGATCAAAC TGGTCGTGAT GCACGCTTCC
CCCCCGGACG CCGCCCTGGC GGCCGCATCG GAGGCATCGT TCCTGGTCTG CGATCGTGGG
TATATGCGGC ACCAGGCGCT CTGGCGCGCC GCCGTGGCGG CCGCGGCTCC CTGTCCGGTG
GTGCAGGTGG AGGCCGACGC GATCGTTCCG GTCGAAACCG CGTCCAGCAA GGCCGAATAC
GCGGCGCGCA CGCTGCGGCC GAGGGTTCAC ACCCACGCCC GCTCGTTTTT GACGGAACCG
GCCCCTGCCG AGCTGCGCAA ATCGTCCCTC GATGCGGATC TGAACGGCAT GGACGTCACG
GACACGGCGA GGGTCCTGCG CAAGCTGCGC GCCGATCGCT CGGTTCCTTC CGTGACCCGG
TACTACCGCG GAGGGACAAG CCGCGCAAAA GAATTATTCG AGACTTTTTT GCGGGATGAT
ATCGGCCGAT ACACGGAGGA CCGAAATCAG CCGCACGCCG GCGCCGTGTC GCACATGAGC
ATGTACCTGC ATTTCGGACA GATATCCCCC GTCTACCTGG CGCTCCGGCT CGGAGAAGTC
GGCCGCGAGC GGGATACGCA GAAAGCGGCG TTTCTGGAAC AGTTGCTGGT ACGGCGTGAG
CTCGCCTTGA ATTTCGTCCA TCATACCCGG AATTACGATT CCTATGAATG TCTGCCGCGC
TGGGCGCGGG AAACACTGGC CCGGCACCGC AAAGACCGCC GCGAGTTCCG CTACGGCCGG
CAGGAGCTGG AGAACCTGCG GACACACGAC GAATACTGGA ACGCCGCCAT GACGGAGATG
AAGTTTACCG GCTACATGCA CAATCACATG AGGATGTACT GGGGGAAGAA AATACTGGAG
TGGAGCGAAA CGCCCGAAGA GGCATTCCAG ACCATCCTGG CCCTGAACAA CAAGTATTTC
CTGGACGGCC GCGATCCCAA TTCCTATGCG GGAGCAGGAT GGGTTCTCGG TCTGCACGAC
CGGCCATGGA AGGAGCGCCC GATTTTCGGA ACCGTACGGT ACATGGCCGC CTCCGGTCTC
GAGCGAAAAT GCGACATCAA AGGCTACGTG GAAGAAATGA AGCGGCTGCG TGCTGGGGCG
ACCCAGCCGC GCGCGACGGC GGGATGA
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| Protein sequence | MERSDVEAER ITFLNRQKRS KGAYVLYWMQ QSQRSEFNHA LEYAAHRANS LRQPLVVVFG
LTGDYPEANL RHYTFMLEGL EETGASLQAR GIKLVVMHAS PPDAALAAAS EASFLVCDRG
YMRHQALWRA AVAAAAPCPV VQVEADAIVP VETASSKAEY AARTLRPRVH THARSFLTEP
APAELRKSSL DADLNGMDVT DTARVLRKLR ADRSVPSVTR YYRGGTSRAK ELFETFLRDD
IGRYTEDRNQ PHAGAVSHMS MYLHFGQISP VYLALRLGEV GRERDTQKAA FLEQLLVRRE
LALNFVHHTR NYDSYECLPR WARETLARHR KDRREFRYGR QELENLRTHD EYWNAAMTEM
KFTGYMHNHM RMYWGKKILE WSETPEEAFQ TILALNNKYF LDGRDPNSYA GAGWVLGLHD
RPWKERPIFG TVRYMAASGL ERKCDIKGYV EEMKRLRAGA TQPRATAG
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