| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3115 |
|---|
| Symbol | |
|---|
| ID | 4458560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3828201 |
|---|
| End bp | 3829082 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639703886 |
|---|
| Product | YdjC family protein |
|---|
| Protein accession | YP_847223 |
|---|
| Protein GI | 116750536 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00112169 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGCA TTCTCGTTAT CAACGCCGAC GACTTCGGCT ATACCGGCGG GATCAACGCC
ACAATCCAAT GCTGCGCCGC CGAAGGGGTC CTTCGCAACA CGACGCTCAT GGCGAACGGT
CCCGCCTTCG ACGATGCGGT TGCCATTGCC AAAGCGAACC GGTCGCTGAG CGTTGGCGTT
CATCTCAACC TCACGGAACT GAAACCGGTC GCGAGTCCGG ACAAGGTTCC CACGCTGGTC
GATGAAACCG GCGCGATGCA GTCGAGTCCC CGCGGCCTTG CCGCAGCGCT GGTCAGCGGA
GCAGTCTCGG CGGGGGACAT TCGAAGGGAG CTTCTGGCAC AGGTTTCCAA AATCATGGAC
TGCGGTATCG TGCCGACGCA TCTCGACAGT CACAAGCACG TGCACGTTCT TCCCCCGGTT
CTGGAAGTCG CGATCGAGAT CGCGCGCAGG TATTCCATCC CCTGGATCAG GAACCCCTTC
GAAGATGCAT CCGCGTGGCG GCTGATCACA GCGGTTGGGA AGAACGACCG CCGCGTGTTC
TTGAAGCAGT ATGCGGAGGC GAACATCATC AAGCCGTTGC AGCCTGTGTT CAGGCATTTC
GTAAGGCGGT CGGGCCTGAG GACTCCGGAC GGCTTCCACG GCCTTTCAGT GACCGGCCTC
TGGAACGAAA AGGTCCTGAG TCGCCTGGTC GGACGGCTGA AGCCGGGCGT GAACGAATGG
ATGGTACACC CCGGGGTGGT CGATCAGGCA TTGAAGAATG CCCGAACCCG GTTGCTCGGT
CAACGGGAAG TGGAACGTGA CATCCTGCTC TCACCCGTTT GGGTGAGTCT TTCGGACAGG
CATGGATTCA GCGTGAGGGG TTTTGGAGAG GAGCTGTCGT GA
|
|---|
| Protein sequence | MKCILVINAD DFGYTGGINA TIQCCAAEGV LRNTTLMANG PAFDDAVAIA KANRSLSVGV
HLNLTELKPV ASPDKVPTLV DETGAMQSSP RGLAAALVSG AVSAGDIRRE LLAQVSKIMD
CGIVPTHLDS HKHVHVLPPV LEVAIEIARR YSIPWIRNPF EDASAWRLIT AVGKNDRRVF
LKQYAEANII KPLQPVFRHF VRRSGLRTPD GFHGLSVTGL WNEKVLSRLV GRLKPGVNEW
MVHPGVVDQA LKNARTRLLG QREVERDILL SPVWVSLSDR HGFSVRGFGE ELS
|
|---|
| |