Gene Sfum_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3057 
Symbol 
ID4458607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3765316 
End bp3766290 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID639703829 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_847166 
Protein GI116750479 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.223751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTTC CGGTGTATCG GCCCAGGCGC TTTCGGCGCA CTGAAAACCT GCGACGGATG 
GTCAGGGAGA CGTCCCTCAG GGTGGACCAA CTGGTGTATC CTCTGTTCGT GATGCCCGGG
AAAGGGGTGA AGAACCCGGT TCCGTCCATG CCCGGGGTCC ACCAGTTCTC CGTGGACACG
CTGCTCAAGG AAGTGAAAAG CGCCGCGGGC CTGAACATCC CTGCCGTGTT GCTGTTCGGC
CTGCCTTCCG CCAAGGACGA GTGGGGGAGT GAGGCTCATG CGGAAAGCGG TGCGGTTCAA
CAGGCGACCC GGGCCATCAA GGACCGGTAT CCCGACCTGG TGGTGATCAC CGACGTGTGT
TTGTGTGAAT ACACCAGCCA CGGACACTGC GGTCTTCTCA AGGGCAAGGA GGTGGATAAC
GACGCCACGC TCGAGGTGCT GGCGAAGACG GCGTTGTCCC ACGCGCAGTC GGGGGCGGAC
CTGGTGGCGC CTTCCGACAT GATGGACGGG AGAGTGGGAG CCATCAGGGA GGCGCTCGAT
GAGAGCGGGC TCGACCAGGT GGGCATCCTG GCATACTCCG CAAAGTACTG TTCGGGATTC
TACGGTCCGT TCCGGGACGC GGCGGACTCG GCGCCTCAGT TCGGAGACCG CCGCGCCTAC
CAGATGGATA TGGCCAACTC CGAGGAAGCC ATGAGGGAAG TCGCCCTGGA TATCGAGGAA
GGCGCGGACA TGGTCATGGT CAAGCCCGCT TTGCCCTACC TGGACATCAT TCGCCGGGTC
AAGGACGAGT TCGACCGGCC GGTGGCGGCC TACAACGTGA GCGGCGAATA CGCCATGATC
AAGGCGGCGG CGGCCAACGG CTGGCTGGAC GAACAGCGGG TCATGATGGA AACCCTCATT
GCGATCAGGC GGGCGGGCGC CGACCTGATC CTGACCTATT TTGCCAAGGA CGCCGCGAAA
GTCCTCAGGG CATAA
 
Protein sequence
MYFPVYRPRR FRRTENLRRM VRETSLRVDQ LVYPLFVMPG KGVKNPVPSM PGVHQFSVDT 
LLKEVKSAAG LNIPAVLLFG LPSAKDEWGS EAHAESGAVQ QATRAIKDRY PDLVVITDVC
LCEYTSHGHC GLLKGKEVDN DATLEVLAKT ALSHAQSGAD LVAPSDMMDG RVGAIREALD
ESGLDQVGIL AYSAKYCSGF YGPFRDAADS APQFGDRRAY QMDMANSEEA MREVALDIEE
GADMVMVKPA LPYLDIIRRV KDEFDRPVAA YNVSGEYAMI KAAAANGWLD EQRVMMETLI
AIRRAGADLI LTYFAKDAAK VLRA