Gene Sfum_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2982 
Symbol 
ID4458707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3684133 
End bp3685851 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content60% 
IMG OID639703754 
Productacetolactate synthase, large subunit, biosynthetic type 
Protein accessionYP_847091 
Protein GI116750404 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000024883 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGC GGGGAGCTCA GATATTTTTC GAGTGCTTGA AGAAGGAAGG GGTCGAGGTC 
ATCTTCGGTT TCCCCGGCGG GGCAGTGCTC GACATATACC ACGAGATGCC AAAGCACAAT
ATTCGGCACA TCCTGGTGCG CCACGAACAG GGTGCCGCTC ACATGGCCGA CGGTTACGCC
AGGGCGAGCG GACGCGTCGG TGTGTGCCTG GTTACCTCCG GCCCGGGCGC CACCAACACG
GTCACCGGCG TCGCCACCGC GTACATGGAT TCCGTCCCCA TGGTGGTCTT TACCGGGCAG
GTGCCGACGC CGCTTATCGG CGACGATGCC TTCCAGGAAG TGGACATCAT CGGCATTACA
CGTCCGTGCA CGAAGCACAG CTACCTCGTG CGCAACGTCA ACGACATGTC CCGGGTGATT
CGCGAGGCGT TTTACCTGGC GCGCACGGGG CGGCCCGGTC CGGTTGTGGT CGACCTGCCC
AAGGACGTGA TCCAGGCCTC CACCGACTTC AAGTATCCCA AGAAGGTGGA CCTTCCCGGC
TACCGTCCCA CGGTCGAAGC CCATTCCGGG CAGGTAAAGC GGGCGTACGA GGTTTTGAGG
AAGGCCAAAT CGCCGCTCAT CTTCGCGGGA GGCGGTATCA TCATTTCGGA TTCATCGCAG
GAGTTGATCA GGATAGCCGA CCTGATCCAG GCCCCGGTGA CCTGCTCGCT CATGGGCCTT
GGCTGTTTTC CGGCCGGGAT TGCCGACGCC AAAGGCCGGC GGCGGCCCAA TCCGCTCTGG
CTGGGTATGG TGGGGATGCA CGGCACCTAC CAGGCGAACA TGGCGATATC CCAGGCCGAT
GTGATCTTCG GCGTCGGCGT GCGCTTCGAC GACCGTGTCA CCGGCAAGAT CAGCGAGTTT
GCGCCGAAGG CCAAAATCAT ACACATTGAC GTCGACCCGT CGAGCATCAG CAAGAACGTG
GTGGTTGACG TTCCCATTGT GGGCGACTGC AAGAATGCGC TCCAGCAGTT GATCCGGTTG
TTCGAAGGCG AACCCCTGGA AGGTGTTTCC GACGTGCGAC GCCCTTGGTT CGATCAGATC
AACGCATGGA AAAAAGGACA TCCGCTCACT TATGTTCAGG GAAACGAGCT CATAAAGCCC
CAATACGTCA TTGAAAAAAT CTGGGAGCTC ACCGGCGGCG ATGCCATCAT CACGACGGAA
GTGGGCCAGC ACCAGATGTG GACCGCCCAG TTCTTCGAAT TCGACCGCCC GCGCTCCCTG
CTGACCTCCG GAGGCCTGGG AACGATGGGC TACGGGTTTC CGGCCGCCAT CGGCGCGCAG
ATGGCCTTCC CCGACAGGCT CGTCATCGAC ATTGCGGGAG ACGGGAGCAT CCAGATGAAC
ATCCAGGAGC TTTGTACGGC CGTCTGCAAT GACATCCCGG TGAAAGTGGC GATCCTCAAC
AATCTCTACC TGGGATTGCC CCGCCAATGG CAGGAGCTTT TCTACGAGAA GAACTACACG
GGGTCCTGCA TGGAAGGCTC TCCGGATTTC GTGAAGCTCG CCGAGGCCTA CGGAGCGATT
GGGCTGAGGG CCAATAAGCC CGAAGAAGTC GAGCCGGTTC TGCGGGAAGC TTTCAAGATC
AGAAAGCCTG TACTGATGGA CTTCCTCGTG TCGCGGGAAG AAGGCGTTTA CCCCATAGTC
CCGCCCGGAA AGAGCATAAC CGAGATGCTT CTGGCGTAG
 
Protein sequence
MKMRGAQIFF ECLKKEGVEV IFGFPGGAVL DIYHEMPKHN IRHILVRHEQ GAAHMADGYA 
RASGRVGVCL VTSGPGATNT VTGVATAYMD SVPMVVFTGQ VPTPLIGDDA FQEVDIIGIT
RPCTKHSYLV RNVNDMSRVI REAFYLARTG RPGPVVVDLP KDVIQASTDF KYPKKVDLPG
YRPTVEAHSG QVKRAYEVLR KAKSPLIFAG GGIIISDSSQ ELIRIADLIQ APVTCSLMGL
GCFPAGIADA KGRRRPNPLW LGMVGMHGTY QANMAISQAD VIFGVGVRFD DRVTGKISEF
APKAKIIHID VDPSSISKNV VVDVPIVGDC KNALQQLIRL FEGEPLEGVS DVRRPWFDQI
NAWKKGHPLT YVQGNELIKP QYVIEKIWEL TGGDAIITTE VGQHQMWTAQ FFEFDRPRSL
LTSGGLGTMG YGFPAAIGAQ MAFPDRLVID IAGDGSIQMN IQELCTAVCN DIPVKVAILN
NLYLGLPRQW QELFYEKNYT GSCMEGSPDF VKLAEAYGAI GLRANKPEEV EPVLREAFKI
RKPVLMDFLV SREEGVYPIV PPGKSITEML LA