Gene Sfum_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2949 
Symbol 
ID4458709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3640981 
End bp3641532 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content62% 
IMG OID639703721 
Productamino acid-binding ACT domain-containing protein 
Protein accessionYP_847058 
Protein GI116750371 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.582988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCATCATTTC CGTTCTCGGG CACGACAGAC CGGGCATCAT TGCCGCCGTC 
TCGAAGATAC TGCTCGAACA CGAGTGCAAT ATCGAAGACG TCAGCCAGAC GATTCTCCAG
ACGGAGTTCG CCGGCATCTT CATCGCCTCG GTTCCCGAGC GCGCCTCCGA ACAGTCGCTG
TCGGCAGCCT TGCGCGAGAA GCTCGAACCG ATGGGGTTGT CGGTGCTCCT CAAGCGCATG
TGGGAAACCG AGGTGTGGGC CGCCCCGCCG AGCGAGCCCT TCGTCATCAC CACCGTCGGC
CCGGACCGGC TCGGATTGGT GGCCGGCGTG ACCGAGCTGT TGGCCGGATA CGGAGTGAAC
ATCACCAACC TCAAGGCGTT GTTCCGTGGC GGCAGCGATC CCACGCGCAA CGTCATGATC
TATGAAGTGG ACATTCCGCT GGGAATCGAT CAACACGCCT TCCGCGCGGC GCTCCAGGAG
CGCTGCCGGG AACTTGACCT CGATGTGAGC CTCCAGCACC GGGACGTGTT CGAGGCGATT
CACCGCGTAT AG
 
Protein sequence
MKKIIISVLG HDRPGIIAAV SKILLEHECN IEDVSQTILQ TEFAGIFIAS VPERASEQSL 
SAALREKLEP MGLSVLLKRM WETEVWAAPP SEPFVITTVG PDRLGLVAGV TELLAGYGVN
ITNLKALFRG GSDPTRNVMI YEVDIPLGID QHAFRAALQE RCRELDLDVS LQHRDVFEAI
HRV