| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2942 |
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| Symbol | |
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| ID | 4458735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3630334 |
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| End bp | 3631371 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703713 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_847051 |
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| Protein GI | 116750364 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGGGC CATCTTTCCC ACGATCTCTC TGTGTTTTCA TGATTTGCCT GTTCTTTCTT
GTCTCGGCGG TTCCCGCTTC TCTCGCCGCG GAAGAGCAGC GCTTGTTTCG CATCGGAACC
GGGGGCCTCA CCGGTGTTTA TTACCCGATA GGCAAGTTGA TCGCGAAAGG ACTGACCGAA
TACGGCCAGG GAAAGACCGT TGCCGGAGAG GGGAAAAGCG GCGTGAGCGG ACTGGTTGGC
GTGGCTCAGA ACTCCGCGGG GTCCGTGGAA AACGTGCGCA ATGTGGTTTC CGGTGAGATC
GAAGCCGGAT TGGTCCAGGC CGATGTTGCG GCTTTGGCGT TCCGGGGGGA AAATGTCTTC
GCCGGGGATG AAGGTCCGCG GAAGCTTCGG GCGGTGGCGA GCCTCTATCC CGAAAAGTTT
CAGATCGTGA CGCGACGGGA CGCCGATATC CGGCGGTTTT CCGATCTGCG CGGAAAACGC
ATTTCCATCG ACGAGAAGGG TTCGGGGACG CTGTCGGTCA TGCGGATTGT TCTGGAAGCC
CACGGCTTGT CCGAGAGAGA CTTGCTCCCC GTGTACCTGA AACCGGTGTT CACTCACGAC
AAGATGGTCA GCGGCGAACT GCAGGGTTTT GTGATGATGG CGGGGGTCCC CATGGAAGCG
GTTACCCGCG TCTCCGACAT CGGCATATCC CTTGTTCCCA TTGATCCCGA GATCGCGTCG
CAAATCGCCA AACGGTCTCC ATACCTCGTT CCCTCAACGA TTGCCGCCGG TGCCTATCCA
GGGATTCCGG AGATTTCGAC CCTGCAGGTC TTCGCCCTGC TGACGGTCAG TTCCGAATCC
CCCGAGGGTC TCGTGCATGA AGTGACTGCC GCCCTTTGGA GTGAACGGAC GCTCTCGCTT
CTCCATGAGG GGCACCCGCA GGGGAAGTTG ATAACCTTGA AGACCGCCCT GGACGGCATC
CCGATACCCC TTCATCCAGG TGCGGAAAGA TTCTACAGGG AACAAGGGAT CACTCCAAAG
GAAGCTCCGA TGCCATGA
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| Protein sequence | MTGPSFPRSL CVFMICLFFL VSAVPASLAA EEQRLFRIGT GGLTGVYYPI GKLIAKGLTE
YGQGKTVAGE GKSGVSGLVG VAQNSAGSVE NVRNVVSGEI EAGLVQADVA ALAFRGENVF
AGDEGPRKLR AVASLYPEKF QIVTRRDADI RRFSDLRGKR ISIDEKGSGT LSVMRIVLEA
HGLSERDLLP VYLKPVFTHD KMVSGELQGF VMMAGVPMEA VTRVSDIGIS LVPIDPEIAS
QIAKRSPYLV PSTIAAGAYP GIPEISTLQV FALLTVSSES PEGLVHEVTA ALWSERTLSL
LHEGHPQGKL ITLKTALDGI PIPLHPGAER FYREQGITPK EAPMP
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