Gene Sfum_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2879 
Symbol 
ID4458811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3555705 
End bp3557204 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content64% 
IMG OID639703653 
ProductL-lactate permease-like 
Protein accessionYP_846991 
Protein GI116750304 
COG category[C] Energy production and conversion 
COG ID[COG1620] L-lactate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.529582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG ATCCCTTCGA TTTCTTCATG TCCTGGACCC CCATTCTTCT CATCATGGCA 
CTGGCCCTGG GCTTCAAACG CCAGGCACTG GAGCTGGCCG TCTGGGGGAC CGCGTACACG
ATCGGGCTGG TGCTCGTCTG GTTCAAGACC TCGCCGGTCG TCGTCCTGCT GGCGGGACTG
GACGGTCTGC TGACCAATCT GCCCCTGCTG CTGGTCATTC ATTCCGGAAT GCTGCTCTGC
GGACTGCTTC TGGAAACCGG TTCTCTGTCC CGCGTCGTGG GGTGGTTCTC GAGCATCACG
AGCAACTGGT GGCAGAATGT CCTACTGATC GCGGTGGGCG TCGGGAACCT CACGGAAGGC
GCGGGGATCG TGGCGGAACC GATAGTTGCT CCGATGCTGC TCACGGCGGG CCTTCCCTCA
ACAGGTGCCG CGGCTCTTTC GGTTGCGGGC TACGCCGGCC TCATGATCCT CGAGCTGGGC
GGGGCCATCC TCACCGTATT GCTTTTCGTG ACCGGGCTGG AAATGGATCT GCTGACCCGG
GATGTCGCGC TGCTTTCCGC GTTCGCGACG GCGCTCATCA TTTACGCGAT GCCATGGCTG
CTGGGGCGGG GCAGGGAATG GGGCTCCCTT TTTCCGCTCC TCACGGTCGT GGCCTTGCTG
GCGGGGGGCG GAACGGTGCT TGCCGCCCGT TATGTTGGAG GAGCGGTGGC CGGCCTGGCC
GGAGGGCTTG TCGTCATTTT CGGTCTGAGC CTCCCGGGGT TGCGCCGCCG GCACCTGCCG
CCGAAACTTC TCGCGGACAT TGCTCCGCTG CTTTTCCTGG TGGTCTGTCT TTTCTCCGTC
AACCTCATCG AACCCGTCAA GCGCGCGGCC ATGGAAACCT GGCCCGGGAC GGTCGCCATC
GTGCCGGGCC ACGACATCCA TTTTCGTCCG TTGGCCTCCG CGTACACCTA CATCATTCTG
TCCTACCTTC TTGCGGCGTG GATCGTCCGC GACCGCTGCA GGGTCTGGAG GAACTTTGCC
GACGCCAATG TACGGGCATG GCGGCCGGTC CTTGCCATGG CGCTCTTCGG CATGGCCGGC
CAGATCATCT CCTTTTCGGG TTATCACCCG GGTTTTGCGG AATCGGACCC CTCGTGCAGC
ATCCCCCACA CCCTGGCCCA CGGGCTGGTC GGGATATCCG GCAGGCTCTA CCCGTTGTTC
GCCCCCCTGG TCGGCTGGGC GGGCACATTC CTGACCGGCT ACGGAACGGC ATCCATCGTG
CTGTTCGGGA AGCTCCACGT CACCACCGCC CAACTCCTCC ATGTGCCGCC GTCTCTTCTC
GCCGCGGGCA TGGCGGTGGG AAGTGCCGTC GGCTCCCTGT CTTCTCCCAT GAAGGTTGCC
CTGGCCGCTT CCATGTGCGG CGCCATCGGC AGGGAAGCGG AGATCCTCCG CCGGACCATT
CCCCTGGGAA TCCTACTGAG CCTGGCGATC GGGGCGCTGC TCATGGTCAT GCTCGGCTGA
 
Protein sequence
MAIDPFDFFM SWTPILLIMA LALGFKRQAL ELAVWGTAYT IGLVLVWFKT SPVVVLLAGL 
DGLLTNLPLL LVIHSGMLLC GLLLETGSLS RVVGWFSSIT SNWWQNVLLI AVGVGNLTEG
AGIVAEPIVA PMLLTAGLPS TGAAALSVAG YAGLMILELG GAILTVLLFV TGLEMDLLTR
DVALLSAFAT ALIIYAMPWL LGRGREWGSL FPLLTVVALL AGGGTVLAAR YVGGAVAGLA
GGLVVIFGLS LPGLRRRHLP PKLLADIAPL LFLVVCLFSV NLIEPVKRAA METWPGTVAI
VPGHDIHFRP LASAYTYIIL SYLLAAWIVR DRCRVWRNFA DANVRAWRPV LAMALFGMAG
QIISFSGYHP GFAESDPSCS IPHTLAHGLV GISGRLYPLF APLVGWAGTF LTGYGTASIV
LFGKLHVTTA QLLHVPPSLL AAGMAVGSAV GSLSSPMKVA LAASMCGAIG REAEILRRTI
PLGILLSLAI GALLMVMLG